fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015852 not found in 390aa AT1G26780.1 1st_1st 0.457202505 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G26780.1     MFITEKQVWMDEIVARRASSSWDFPFNDINIHQHHHRHCNTSHEFEILKSPLGDVAVHEE
Sb015852_Sorbi1 ------------MPCSSAAPTW-----------------------------LLRVASAAD
                            : .  *:.:*                             *  **   :

AT1G26780.1     ESNNNNPNFSNSESGKK--------ETTDSGQSW-----------SSSSSKPSVLGRGHW
Sb015852_Sorbi1 QASSS----SSSKGGGRVLTAGTTGTTMDTAATAAAAGNAADLQESSSSGQSRLAARGHW
                ::...    *.*:.* :         * *:. :            ****.:. : .****

AT1G26780.1     RPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERL
Sb015852_Sorbi1 RPAEDAKLRELVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRISKRPFSDEEEERL
                *****.**:***::*************:*******************.:*.*::******

AT1G26780.1     MQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKL----------
Sb015852_Sorbi1 MAAHRFYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSTAYRRRKLNQAVQRKLEA
                * ***:******************:*******:*******:*:*******          

AT1G26780.1     -------------MSNNPLKPHLTNNHH-------PNPNPNYHSFISTNHY----FAQ--
Sb015852_Sorbi1 SAAAVATMPPAAGSTGDVVGAALGHHHHQLLAAAAAAAHDAAYGFAAADPYGAFGFRQYY
                              :.: : . * ::**       . .:   :.* ::: *    * *  

AT1G26780.1     PF-------------PEFNLTHHLVNNAPITSD---------------------------
Sb015852_Sorbi1 PFPPASAEDTPPPPPPPFCLFPGPSSAAALHADSRRLPWPSSSSSDAAAAAAGGGRYGEP
                **             * * *     . *.: :*                           

AT1G26780.1     HNQLVLPF------------------H-----------CFQGSL----------------
Sb015852_Sorbi1 QQQLLLPVVHGGSWIDGVGVAVAGGHHEAQFVLGNNGGAFEGTTRQQGAAAGAHFEAAAA
                ::**:**.                  *           .*:*:                 

AT1G26780.1     ---------------
Sb015852_Sorbi1 APPPAFIDFLGVGAT
BoxShade v3.31 C (beta, 970507) Output
AT1G26780.1     M F I T E K Q V W M D E I V A R R A S S S W D F P F N D I N I H Q H H H R H C N T S H E F E I L K S P L G D V A V H E E
Sb015852_Sorbi1    - - - - - - - - - - - - M P C S S A A P T W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L L R V A S A A D
 
AT1G26780.1     E S N N N N P N F S N S E S G K K - - - - - - - - E T T D S G Q S W - - - - - - - - - - - S S S S S K P S V L G R G H W
Sb015852_Sorbi1    Q A S S S - - - - S S S K G G G R V L T A G T T G T T M D T A A T A A A A G N A A D L Q E S S S S G Q S R L A A R G H W
 
AT1G26780.1     R P A E D V K L K E L V S I Y G P Q N W N L I A E K L Q G R S G K S C R L R W F N Q L D P R I N R R A F T E E E E E R L
Sb015852_Sorbi1    R P A E D A K L R E L V A L Y G P Q N W N L I A E K L D G R S G K S C R L R W F N Q L D P R I S K R P F S D E E E E R L
 
AT1G26780.1     M Q A H R L Y G N K W A M I A R L F P G R T D N S V K N H W H V V M A R K Y R E H S S A Y R R R K L - - - - - - - - - -
Sb015852_Sorbi1    M A A H R F Y G N K W A M I A R L F P G R T D N A V K N H W H V I M A R K Y R E Q S T A Y R R R K L N Q A V Q R K L E A
 
AT1G26780.1     - - - - - - - - - - - - - M S N N P L K P H L T N N H H - - - - - - - P N P N P N Y H S F I S T N H Y - - - - F A Q - -
Sb015852_Sorbi1    S A A A V A T M P P A A G S T G D V V G A A L G H H H H Q L L A A A A A A A H D A A Y G F A A A D P Y G A F G F R Q Y Y
 
AT1G26780.1     P F - - - - - - - - - - - - - P E F N L T H H L V N N A P I T S D - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb015852_Sorbi1    P F P P A S A E D T P P P P P P P F C L F P G P S S A A A L H A D S R R L P W P S S S S S D A A A A A A G G G R Y G E P
 
AT1G26780.1     H N Q L V L P F - - - - - - - - - - - - - - - - - - H - - - - - - - - - - - C F Q G S L - - - - - - - - - - - - - - - -
Sb015852_Sorbi1    Q Q Q L L L P V V H G G S W I D G V G V A V A G G H H E A Q F V L G N N G G A F E G T T R Q Q G A A A G A H F E A A A A
 
AT1G26780.1     - - - - - - - - - - - - - - -
Sb015852_Sorbi1    A P P P A F I D F L G V G A T
 
0