fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26945.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009859 not found in 88aa AT1G26945.1 not_1st 0.659420289 II
Os024206 not found in 87aa AT1G26945.1 not_1st 0.644927536 II
Os011458 not found in 91aa AT1G26945.1 not_1st 0.644927536 II
Os035852 not found in 88aa AT1G26945.1 not_1st 0.608695652 II
Sb003265 not found in 86aa AT1G26945.1 not_1st 0.630434782 II
Gm000625 not found in 93aa AT1G26945.1 not_1st 0.869565217 II
Gm022905 not found in 93aa AT1G26945.1 not_1st 0.862318840 II
Gm049258 not found in 93aa AT1G26945.1 not_1st 0.833333333 II
Gm051002 not found in 91aa AT1G26945.1 not_1st 0.804347826 II
Gm035037 not found in 91aa AT1G26945.1 not_1st 0.804347826 II
Gm025833 not found in 91aa AT1G26945.1 not_1st 0.782608695 II
Gm050375 not found in 92aa AT1G26945.1 not_1st 0.775362318 II
Pt004762 not found in 90aa AT5G39860.1 1st_not 0.789855072 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G26945.1     MSSRRSSRSRQSG-SSRISDDQISDLVSKLQHLIPELRRRRS--DKVSASKVLQETCNYI
gm051002_Glyma1 MSSRR---SRQQSASTRISDDQIIDLVSKLRQLVPEIRDRRS--DKVSASKVLQETCNYI
pt004762_POPTR_ MSSRR---PRQ-SSVPRITDDQIIDLVSKLRQLLPEISQRRS--DKVSASKVLQETCNYI
gm022905_Glyma0 MSSRR-SRSRQSGVSTEITDAQITDLISKLQQLIPELRARRS--DKVSASKVLQETCNYI
Sb003265_Sorbi1 MSSRR--------SRASVSEEEINELISRLQTLLP-SARRRGG-SEASTTKLLKETCSYI
Os009859_Os02t0 MSSRR-------SSRGSISEEEINELISKLQSLLP-NSRRRGS-SQASTTKLLKETCNYI
gm025833_Glyma0 MSSRR---SRQHSGSTRISDDQIIELVSKLRQLVPEIRNRRS--DKVSASKVLQETCNYI
Os011458_Os03t0 MSSRRGG----GGGGGRITDEEINELISKLQALLPESSRSRGA-SRSSASKLLKETCSYI
gm000625_Glyma0 MSSRR-SRSRQSGASAEITDAQITDLVSKLQQLIPELRARRS--DKVSSAKVLQETCNYI
Os024206_Os06t0 MSSRR-------SSRSSVSEEEINELISKLQSLLP-SSRRRGA-NQASTTKLLKETCSYI
gm035037_Glyma1 MSSRR---SRQQSASTRISDDQIIDLVSKLRQLVPEIRDRRS--DKVSASKVLQETCNYI
gm050375_Glyma1 MSSRR---SRQHSGSTRISDDQIIELVSKLRQLVPEIRNRRS--DKVSASKVLQETCNYI
Os035852_Os10t0 MSGRR--------ASGRITDDEINELISKLQSLLPESSRRRGATSRSPATKLLKEMCSYI
gm049258_Glyma1 MSSRR-SRSSQSDVSTEITDAQITDIISKLQQLIPELDARRS--DKVSASKVLQETCNYI
                **.**            ::: :* :::*:*: *:*     *.  .. .::*:*:* *.**

AT1G26945.1     RNLHREVDDLSDRLSELLASTDDNSAEAAIIRSLLNY
gm051002_Glyma1 RSLHREVDDLSERLSQLLATIDADSPEAAIIRSLIN-
pt004762_POPTR_ RNLHREVDDLSERLSQLLATIDADSPEAAIIRSLIM-
gm022905_Glyma0 KSLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLM-
Sb003265_Sorbi1 KSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR-
Os009859_Os02t0 KSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILRS
gm025833_Glyma0 RSLHREVSDLSERLSQLLTTIDADSAEAGIIRSLLN-
Os011458_Os03t0 KSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR-
gm000625_Glyma0 KNLHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM-
Os024206_Os06t0 KSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR-
gm035037_Glyma1 RSLHREVDDLSERLSQLLATIDADSPEAAIIRSLIN-
gm050375_Glyma1 RGLHREVSDLSERLSQLLTTIDADSAEAGIIRSLLNQ
Os035852_Os10t0 KSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR-
gm049258_Glyma1 KSLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLL-
                :.*****.***:***:*::  * :*. * ****::
BoxShade v3.31 C (beta, 970507) Output
AT1G26945.1     M S S R R S S R S R Q S G - S S R I S D D Q I S D L V S K L Q H L I P E L R R R R S - - D K V S A S K V L Q E T C N Y I
gm051002_Glyma1    M S S R R - - - S R Q Q S A S T R I S D D Q I I D L V S K L R Q L V P E I R D R R S - - D K V S A S K V L Q E T C N Y I
pt004762_POPTR_    M S S R R - - - P R Q - S S V P R I T D D Q I I D L V S K L R Q L L P E I S Q R R S - - D K V S A S K V L Q E T C N Y I
gm022905_Glyma0    M S S R R - S R S R Q S G V S T E I T D A Q I T D L I S K L Q Q L I P E L R A R R S - - D K V S A S K V L Q E T C N Y I
Sb003265_Sorbi1    M S S R R - - - - - - - - S R A S V S E E E I N E L I S R L Q T L L P - S A R R R G G - S E A S T T K L L K E T C S Y I
Os009859_Os02t0    M S S R R - - - - - - - S S R G S I S E E E I N E L I S K L Q S L L P - N S R R R G S - S Q A S T T K L L K E T C N Y I
gm025833_Glyma0    M S S R R - - - S R Q H S G S T R I S D D Q I I E L V S K L R Q L V P E I R N R R S - - D K V S A S K V L Q E T C N Y I
Os011458_Os03t0    M S S R R G G - - - - G G G G G R I T D E E I N E L I S K L Q A L L P E S S R S R G A - S R S S A S K L L K E T C S Y I
gm000625_Glyma0    M S S R R - S R S R Q S G A S A E I T D A Q I T D L V S K L Q Q L I P E L R A R R S - - D K V S S A K V L Q E T C N Y I
Os024206_Os06t0    M S S R R - - - - - - - S S R S S V S E E E I N E L I S K L Q S L L P - S S R R R G A - N Q A S T T K L L K E T C S Y I
gm035037_Glyma1    M S S R R - - - S R Q Q S A S T R I S D D Q I I D L V S K L R Q L V P E I R D R R S - - D K V S A S K V L Q E T C N Y I
gm050375_Glyma1    M S S R R - - - S R Q H S G S T R I S D D Q I I E L V S K L R Q L V P E I R N R R S - - D K V S A S K V L Q E T C N Y I
Os035852_Os10t0    M S G R R - - - - - - - - A S G R I T D D E I N E L I S K L Q S L L P E S S R R R G A T S R S P A T K L L K E M C S Y I
gm049258_Glyma1    M S S R R - S R S S Q S D V S T E I T D A Q I T D I I S K L Q Q L I P E L D A R R S - - D K V S A S K V L Q E T C N Y I
 
AT1G26945.1     R N L H R E V D D L S D R L S E L L A S T D D N S A E A A I I R S L L N Y
gm051002_Glyma1    R S L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I N -
pt004762_POPTR_    R N L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I M -
gm022905_Glyma0    K S L H R E V D D L S D R L S Q L L A T T D S N S A Q A A I I R S L L M -
Sb003265_Sorbi1    K S L H R E V D D L S D R L S D L M A T M D H N S P G A E I I R S L L R -
Os009859_Os02t0    K S L H R E V D D L S D R L S D L M A T M D H N S P G A E I I R S I L R S
gm025833_Glyma0    R S L H R E V S D L S E R L S Q L L T T I D A D S A E A G I I R S L L N -
Os011458_Os03t0    K S L H R E V D D L S D R L S E L M S T M D N N S P Q A E I I R S L L R -
gm000625_Glyma0    K N L H R E V D D L S D R L S E L L A N T D S N S A Q A A I I R S L L M -
Os024206_Os06t0    K S L H R E V D D L S D R L S D L M A G M D H N S P G A E I I R S L L R -
gm035037_Glyma1    R S L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I N -
gm050375_Glyma1    R G L H R E V S D L S E R L S Q L L T T I D A D S A E A G I I R S L L N Q
Os035852_Os10t0    K S L H R E V D D L S E R L S E L M A T M D S N S P Q A D I I R S L L R -
gm049258_Glyma1    K S L H R E V D D L S D R L S Q L L A T T D S N S A Q A A I I R S L L L -
 
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