fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26945.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011454 not found in 92aa AT1G26945.1 1st_1st 0.731884057 Ia
Sb022206 not found in 213aa AT1G26945.1 1st_1st 0.695652173 Ia
Gm002763 not found in 93aa AT1G26945.1 1st_1st 0.876811594 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G26945.1     ----------------------------------------MSSRRSSRSRQSG-SSRISD
Os011454_Os03t0 ----------------------------------------MSSRR-SRSRQSG-SSRITD
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRR-SRSRQSG-SSRITE
gm002763_Glyma0 ----------------------------------------MSSRR-SRSRQSGASAEITD
                                                        ***** ******* *:.*::

AT1G26945.1     DQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNLHREVDDLSDRLSELLASTD
Os011454_Os03t0 EQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSD
Sb022206_Sorbi1 EQISDLVSKLQDLLPEARLQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSD
gm002763_Glyma0 AQITDLVSKLQQLIPELRARRSDKVSAAKVLQETCNYIKNLHREVDDLSDRLSELLANTD
                 **:*******.*:** * : . :*.:::*********:.**:******:*******.:*

AT1G26945.1     DNSAEAAIIRSLLNY
Os011454_Os03t0 MSSAQAAIIRSLLM-
Sb022206_Sorbi1 MSSAQAAVIRSLLM-
gm002763_Glyma0 SNSAQAAIIRSLLM-
                 .**:**:*****
BoxShade v3.31 C (beta, 970507) Output
AT1G26945.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S S R S R Q S G - S S R I S D
Os011454_Os03t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R - S R S R Q S G - S S R I T D
Sb022206_Sorbi1    L P F H H L C I S N L L A S L L T S Q F V S R S L A K L L S P I S Q T T T S T K M S S R R - S R S R Q S G - S S R I T E
gm002763_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R - S R S R Q S G A S A E I T D
 
AT1G26945.1     D Q I S D L V S K L Q H L I P E L R R R R S D K V S A S K V L Q E T C N Y I R N L H R E V D D L S D R L S E L L A S T D
Os011454_Os03t0    E Q I S D L V S K L Q D L L P E A R L R S N D R V P S S R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D
Sb022206_Sorbi1    E Q I S D L V S K L Q D L L P E A R L Q S N A R V P S A R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D
gm002763_Glyma0    A Q I T D L V S K L Q Q L I P E L R A R R S D K V S A A K V L Q E T C N Y I K N L H R E V D D L S D R L S E L L A N T D
 
AT1G26945.1     D N S A E A A I I R S L L N Y
Os011454_Os03t0    M S S A Q A A I I R S L L M -
Sb022206_Sorbi1    M S S A Q A A V I R S L L M -
gm002763_Glyma0    S N S A Q A A I I R S L L M -
 
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