fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26945.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004762 not found in 90aa AT5G39860.1 1st_not 0.789855072 II

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G26945.1     MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL
pt004762_POPTR_ MSSR---RPRQSSVPRITDDQIIDLVSKLRQLLPEISQRRSDKVSASKVLQETCNYIRNL
                ****   *.***. .**:**** ******::*:**: :**********************

AT1G26945.1     HREVDDLSDRLSELLASTDDNSAEAAIIRSLLNY
pt004762_POPTR_ HREVDDLSERLSQLLATIDADSPEAAIIRSLIM-
                ********:***:***: * :*.********:  


BoxShade v3.31 C (beta, 970507) Output
AT1G26945.1     M S S R R S S R S R Q S G S S R I S D D Q I S D L V S K L Q H L I P E L R R R R S D K V S A S K V L Q E T C N Y I R N L
pt004762_POPTR_    M S S R - - - R P R Q S S V P R I T D D Q I I D L V S K L R Q L L P E I S Q R R S D K V S A S K V L Q E T C N Y I R N L
 
AT1G26945.1     H R E V D D L S D R L S E L L A S T D D N S A E A A I I R S L L N Y
pt004762_POPTR_    H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I M -
 
0