fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26945.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011454 not found in 92aa AT1G26945.1 1st_1st 0.731884057 Ia

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G26945.1     MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL
Os011454_Os03t0 MSSRR-SRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSL
                ***** ***********:*:**********.*:** * * .*:*.:*:**********.*

AT1G26945.1     HREVDDLSDRLSELLASTDDNSAEAAIIRSLLNY
Os011454_Os03t0 HQEVDDLSERLSELLATSDMSSAQAAIIRSLLM-
                *:******:*******::* .**:********  


BoxShade v3.31 C (beta, 970507) Output
AT1G26945.1     M S S R R S S R S R Q S G S S R I S D D Q I S D L V S K L Q H L I P E L R R R R S D K V S A S K V L Q E T C N Y I R N L
Os011454_Os03t0    M S S R R - S R S R Q S G S S R I T D E Q I S D L V S K L Q D L L P E A R L R S N D R V P S S R V L Q E T C N Y I R S L
 
AT1G26945.1     H R E V D D L S D R L S E L L A S T D D N S A E A A I I R S L L N Y
Os011454_Os03t0    H Q E V D D L S E R L S E L L A T S D M S S A Q A A I I R S L L M -
 
1