|
|
|
|
|
|
|
|
| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT1G26945.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Sb003265 | not found in 86aa | AT1G26945.1 | not_1st | 0.630434782 | II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G26945.1 MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL
Sb003265_Sorbi1 MSSRRSRAS-------VSEEEINELISRLQTLLPSARRRGGSEASTTKLLKETCSYIKSL
****** * :*:::*.:*:*:** *:*. *** ..:.*::*:*:***.**:.*
AT1G26945.1 HREVDDLSDRLSELLASTDDNSAEAAIIRSLLNY
Sb003265_Sorbi1 HREVDDLSDRLSDLMATMDHNSPGAEIIRSLLR-
************:*:*: *.**. * ******.
| AT1G26945.1 | M | S | S | R | R | S | S | R | S | R | Q | S | G | S | S | R | I | S | D | D | Q | I | S | D | L | V | S | K | L | Q | H | L | I | P | E | L | R | R | R | R | S | D | K | V | S | A | S | K | V | L | Q | E | T | C | N | Y | I | R | N | L |
| Sb003265_Sorbi1 | M | S | S | R | R | S | R | A | S | - | - | - | - | - | - | - | V | S | E | E | E | I | N | E | L | I | S | R | L | Q | T | L | L | P | S | A | R | R | R | G | G | S | E | A | S | T | T | K | L | L | K | E | T | C | S | Y | I | K | S | L |
| AT1G26945.1 | H | R | E | V | D | D | L | S | D | R | L | S | E | L | L | A | S | T | D | D | N | S | A | E | A | A | I | I | R | S | L | L | N | Y | ||||||||||||||||||||||||||
| Sb003265_Sorbi1 | H | R | E | V | D | D | L | S | D | R | L | S | D | L | M | A | T | M | D | H | N | S | P | G | A | E | I | I | R | S | L | L | R | - | ||||||||||||||||||||||||||