fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26945.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022206 not found in 213aa AT1G26945.1 1st_1st 0.695652173 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G26945.1     ----------------------------------------MSSRRSSRSRQSGSSRISDD
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRR-SRSRQSGSSRITEE
                                                        ***** ***********:::

AT1G26945.1     QISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNLHREVDDLSDRLSELLASTDD
Sb022206_Sorbi1 QISDLVSKLQDLLPEARLQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDM
                **********.*:** * : . :*.:::**********.**:******:*******::* 

AT1G26945.1     NSAEAAIIRSLLNY
Sb022206_Sorbi1 SSAQAAVIRSLLM-
                .**:**:*****
BoxShade v3.31 C (beta, 970507) Output
AT1G26945.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S S R S R Q S G S S R I S D D
Sb022206_Sorbi1    L P F H H L C I S N L L A S L L T S Q F V S R S L A K L L S P I S Q T T T S T K M S S R R - S R S R Q S G S S R I T E E
 
AT1G26945.1     Q I S D L V S K L Q H L I P E L R R R R S D K V S A S K V L Q E T C N Y I R N L H R E V D D L S D R L S E L L A S T D D
Sb022206_Sorbi1    Q I S D L V S K L Q D L L P E A R L Q S N A R V P S A R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D M
 
AT1G26945.1     N S A E A A I I R S L L N Y
Sb022206_Sorbi1    S S A Q A A V I R S L L M -
 
0