fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26945.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010049 not found in 92aa AT1G74500.1 not_not 0.782608695 III
Gm015729 not found in 92aa AT1G74500.1 not_not 0.746376811 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G26945.1     MSSRRSSRSRQSGSSR-ISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRN
gm015729_Glyma0 MSSRR-SRSRQTSSSRNITDDQINDLVSKLQQLLPEIRDRRSDKVSASKVLQETCNYIRS
gm010049_Glyma0 MSSRR-SRSRQTSSSRNITDDQINDLVSKLQQLLPEIRDRRSDKVSASKVLQETCNYIRS
                ***** *****:.*** *:****.*******:*:**:* ********************.

AT1G26945.1     LHREVDDLSDRLSELLASTDDNSAEAAIIRSLLNY
gm015729_Glyma0 LHREVGDLSERLSELLDTTD--TAQAAIIRNLLMQ
gm010049_Glyma0 LHREVDDLSERLSELLATTD--TAQAAIIRNLLMQ
                *****.***:****** :**  :*:*****.**
BoxShade v3.31 C (beta, 970507) Output
AT1G26945.1     M S S R R S S R S R Q S G S S R - I S D D Q I S D L V S K L Q H L I P E L R R R R S D K V S A S K V L Q E T C N Y I R N
gm015729_Glyma0    M S S R R - S R S R Q T S S S R N I T D D Q I N D L V S K L Q Q L L P E I R D R R S D K V S A S K V L Q E T C N Y I R S
gm010049_Glyma0    M S S R R - S R S R Q T S S S R N I T D D Q I N D L V S K L Q Q L L P E I R D R R S D K V S A S K V L Q E T C N Y I R S
 
AT1G26945.1     L H R E V D D L S D R L S E L L A S T D D N S A E A A I I R S L L N Y
gm015729_Glyma0    L H R E V G D L S E R L S E L L D T T D - - T A Q A A I I R N L L M Q
gm010049_Glyma0    L H R E V D D L S E R L S E L L A T T D - - T A Q A A I I R N L L M Q
 
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