fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26945.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002763 not found in 93aa AT1G26945.1 1st_1st 0.876811594 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G26945.1     MSSRRSSRSRQSG-SSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRN
gm002763_Glyma0 MSSRR-SRSRQSGASAEITDAQITDLVSKLQQLIPELRARRSDKVSAAKVLQETCNYIKN
                ***** ******* *:.*:* **:*******:****** ********:**********:*

AT1G26945.1     LHREVDDLSDRLSELLASTDDNSAEAAIIRSLLNY
gm002763_Glyma0 LHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM-
                *****************.**.***:********
BoxShade v3.31 C (beta, 970507) Output
AT1G26945.1     M S S R R S S R S R Q S G - S S R I S D D Q I S D L V S K L Q H L I P E L R R R R S D K V S A S K V L Q E T C N Y I R N
gm002763_Glyma0    M S S R R - S R S R Q S G A S A E I T D A Q I T D L V S K L Q Q L I P E L R A R R S D K V S A A K V L Q E T C N Y I K N
 
AT1G26945.1     L H R E V D D L S D R L S E L L A S T D D N S A E A A I I R S L L N Y
gm002763_Glyma0    L H R E V D D L S D R L S E L L A N T D S N S A Q A A I I R S L L M -
 
0