fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G27650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm018562 not found in 271aa AT1G27650.1 not_1st 0.889552238 II
Gm053476 not found in 268aa AT1G27650.1 not_1st 0.880597014 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G27650.1     MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
gm053476_Glyma2 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP
gm018562_Glyma0 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP
                ****************************************:*******************

AT1G27650.1     GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED
gm053476_Glyma2 GVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIGNVYVQFREED
gm018562_Glyma0 GVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREED
                ***.***.*******:*****:**:* **.***:*****:****************:***

AT1G27650.1     QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL
gm053476_Glyma2 QAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL
gm018562_Glyma0 QAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL
                *** **:**:****..********************:***.**************:.*:*

AT1G27650.1     RRKLFGRYRR----SYRRG--SRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYR
gm053476_Glyma2 RRRLFGRNHRGGSGTYHRV--SRSRSRSRSASPRYRRERRESDSR---------------
gm018562_Glyma0 RRRLFGRHHRGGSGTYHRVSRSRSRSRSRSGSPRHRRERHERDSR---------------
                **:**** :*    :*:*   ********* *** :*:. . *.                

AT1G27650.1     HGSGKRSSERSERQERDGSRGRRQAS-PKRGGSPGGGREGSEERRARIEQWNREREEKEE
gm053476_Glyma2 --GGRRSRE----RDGSGGRRRQHGSPP--------AREGSEERRARIEQWNREREENK-
gm018562_Glyma0 ---GRRSRER-EYRERDGGGRRRHGS-P--------AREGSEERRARIEQWNREREEKQ-
                   *:** *    :: .*.  *::.* *        .********************:: 

AT1G27650.1     GGA
gm053476_Glyma2 ---
gm018562_Glyma0 ---
BoxShade v3.31 C (beta, 970507) Output
AT1G27650.1     M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P T I S P T L L L S N M Y Q R P D M I T P
gm053476_Glyma2    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P S I S P T L L L S N M Y Q R P D M I T P
gm018562_Glyma0    M A E H L A S I F G T E K D R V N C P F Y F K I G A C R H G D R C S R L H N R P S I S P T L L L S N M Y Q R P D M I T P
 
AT1G27650.1     G V D A Q G Q P L D P R K I Q E H F E D F F E D L F E E L G K F G E I E S L N I C D N L A D H M I G N V Y V Q F K E E D
gm053476_Glyma2    G V D P Q G Q T L D P R K I Q Q H F E D F Y E D I F T E L A K F G E I E S L N V C D N L A D H M I G N V Y V Q F R E E D
gm018562_Glyma0    G V D P Q G Q P L D P R K I Q Q H F E D F Y E D I F T E L A K F G D I E S L N V C D N L A D H M I G N V Y V Q F R E E D
 
AT1G27650.1     Q A A A A L Q A L Q G R F Y S G R P I I A D F S P V T D F R E A T C R Q Y E E N N C N R G G Y C N F M H V K L V S R E L
gm053476_Glyma2    Q A A K A L H A L R G R F Y N A R P I I A D F S P V T D F R E A T C R Q F E E N S C N R G G Y C N F M H V K L I G R D L
gm018562_Glyma0    Q A A K A L H A L H G R F Y N A R P I I A D F S P V T D F R E A T C R Q F E E N S C N R G G Y C N F M H V K L I G R D L
 
AT1G27650.1     R R K L F G R Y R R - - - - S Y R R G - - S R S R S R S R S I S P R N K R D N D R R D P S H R E F S H R D R D R E F Y R
gm053476_Glyma2    R R R L F G R N H R G G S G T Y H R V - - S R S R S R S R S A S P R Y R R E R R E S D S R - - - - - - - - - - - - - - -
gm018562_Glyma0    R R R L F G R H H R G G S G T Y H R V S R S R S R S R S R S G S P R H R R E R H E R D S R - - - - - - - - - - - - - - -
 
AT1G27650.1     H G S G K R S S E R S E R Q E R D G S R G R R Q A S - P K R G G S P G G G R E G S E E R R A R I E Q W N R E R E E K E E
gm053476_Glyma2    - - G G R R S R E - - - - R D G S G G R R R Q H G S P P - - - - - - - - A R E G S E E R R A R I E Q W N R E R E E N K -
gm018562_Glyma0    - - - G R R S R E R - E Y R E R D G G G R R R H G S - P - - - - - - - - A R E G S E E R R A R I E Q W N R E R E E K Q -
 
AT1G27650.1     G G A
gm053476_Glyma2    - - -
gm018562_Glyma0    - - -
 
0