Input
| Putative repression domain
|
|
AT1G27660.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt000627 |
not found in 430aa |
AT1G27660.1 |
1st_1st |
0.337317397 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G27660.1 MDSANL---HQLQDQLQLVGSSSSSSSLDNNSDPSCYG-ASSAHQWSPGGISLNSVSLSH
pt000627_POPTR_ MESANLHHQHQLQD--QFVGSSSLTT-----ATPSSYAEAGSARAWTQ-TITLNSDNSNP
*:**** ***** *:***** :: : **.*. *.**: *: *:*** . .
AT1G27660.1 NYNNEMLNTRAHNNNNNNNTSECMSLSSIHNHSLIQQQDFPLQWPHDQSSYQHHEG----
pt000627_POPTR_ SYNGVIFNQRQKNES---------PISSL-NSTMFQDLGFHY-WNNNAGNFSSHSAYDLQ
.**. ::* * :*:. .:**: * :::*: .* * :: ..:. *..
AT1G27660.1 LLKIKEELSSSTISDHQEGISKFTDMLNSPVIT---------NYLKINEHKD--YTEKLL
pt000627_POPTR_ LSKIKEGLSSS------DSFPKFTEMLNSPSSTIEDPHVSSSSYIK-DELKDLSLSEKLL
* **** **** :.:.***:***** * .*:* :* ** :****
AT1G27660.1 LKSMSSGFPING-DYGSSLPSSSS----SSSPSSQSHRGNFSQIYPSVNISSLSESRKMS
pt000627_POPTR_ LETISSGFPINGHDQFSPRQISSSHHNCSSFGSAIPSRGSFSQIYPSINISNLNQPSS--
*:::******** * *. *** ** *: . **.*******:***.*.:. .
AT1G27660.1 MDDMSNISRPFDINMQVFD---GRLFEGNVLVPPFNAQEISSLGMSRGSLPSFGLPFHHH
pt000627_POPTR_ ----PLISGSFDMNLQALDLLTSTRFSGSFPQP----ASLDPLDMFKDSL-SFGL---DS
. ** .**:*:*.:* . *.*.. * .:..*.* :.** **** .
AT1G27660.1 LQQTLPHLSSSPTHQMEMFSNEPQTSEGKR-HNFLMATKAGENAS-KKPRVESRSSCPPF
pt000627_POPTR_ IQQSNQRPSCSPSK----ISSTNEITEAKRPNNSMMEPKATQAAAPKKSRLESRSPCPPF
:**: : *.**:: :*. : :*.** :* :* .** : *: **.*:****.****
AT1G27660.1 KVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPG
pt000627_POPTR_ KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKTS
******************:**********************.*:********::***:..
AT1G27660.1 KASQLVSQSQEGDEEETRDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGTGFWPTPPGFGG
pt000627_POPTR_ RSIQAASNSG-GDQESKRDLRSRGLCLVPLSCMSYVTTDG--GGGGI----WP-PPNFGG
:: * .*:* **:*..****************:*** ** ****: ** **.***
AT1G27660.1 GT
pt000627_POPTR_ GT
**
BoxShade v3.31 C (beta, 970507) Output
AT1G27660.1 |
M |
D |
S |
A |
N |
L |
- |
- |
- |
H |
Q |
L |
Q |
D |
Q |
L |
Q |
L |
V |
G |
S |
S |
S |
S |
S |
S |
S |
L |
D |
N |
N |
S |
D |
P |
S |
C |
Y |
G |
- |
A |
S |
S |
A |
H |
Q |
W |
S |
P |
G |
G |
I |
S |
L |
N |
S |
V |
S |
L |
S |
H |
pt000627_POPTR_ |
M |
E |
S |
A |
N |
L |
H |
H |
Q |
H |
Q |
L |
Q |
D |
- |
- |
Q |
F |
V |
G |
S |
S |
S |
L |
T |
T |
- |
- |
- |
- |
- |
A |
T |
P |
S |
S |
Y |
A |
E |
A |
G |
S |
A |
R |
A |
W |
T |
Q |
- |
T |
I |
T |
L |
N |
S |
D |
N |
S |
N |
P |
|
AT1G27660.1 |
N |
Y |
N |
N |
E |
M |
L |
N |
T |
R |
A |
H |
N |
N |
N |
N |
N |
N |
N |
T |
S |
E |
C |
M |
S |
L |
S |
S |
I |
H |
N |
H |
S |
L |
I |
Q |
Q |
Q |
D |
F |
P |
L |
Q |
W |
P |
H |
D |
Q |
S |
S |
Y |
Q |
H |
H |
E |
G |
- |
- |
- |
- |
pt000627_POPTR_ |
S |
Y |
N |
G |
V |
I |
F |
N |
Q |
R |
Q |
K |
N |
E |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
I |
S |
S |
L |
- |
N |
S |
T |
M |
F |
Q |
D |
L |
G |
F |
H |
Y |
- |
W |
N |
N |
N |
A |
G |
N |
F |
S |
S |
H |
S |
A |
Y |
D |
L |
Q |
|
AT1G27660.1 |
L |
L |
K |
I |
K |
E |
E |
L |
S |
S |
S |
T |
I |
S |
D |
H |
Q |
E |
G |
I |
S |
K |
F |
T |
D |
M |
L |
N |
S |
P |
V |
I |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
Y |
L |
K |
I |
N |
E |
H |
K |
D |
- |
- |
Y |
T |
E |
K |
L |
L |
pt000627_POPTR_ |
L |
S |
K |
I |
K |
E |
G |
L |
S |
S |
S |
- |
- |
- |
- |
- |
- |
D |
S |
F |
P |
K |
F |
T |
E |
M |
L |
N |
S |
P |
S |
S |
T |
I |
E |
D |
P |
H |
V |
S |
S |
S |
S |
Y |
I |
K |
- |
D |
E |
L |
K |
D |
L |
S |
L |
S |
E |
K |
L |
L |
|
AT1G27660.1 |
L |
K |
S |
M |
S |
S |
G |
F |
P |
I |
N |
G |
- |
D |
Y |
G |
S |
S |
L |
P |
S |
S |
S |
S |
- |
- |
- |
- |
S |
S |
S |
P |
S |
S |
Q |
S |
H |
R |
G |
N |
F |
S |
Q |
I |
Y |
P |
S |
V |
N |
I |
S |
S |
L |
S |
E |
S |
R |
K |
M |
S |
pt000627_POPTR_ |
L |
E |
T |
I |
S |
S |
G |
F |
P |
I |
N |
G |
H |
D |
Q |
F |
S |
P |
R |
Q |
I |
S |
S |
S |
H |
H |
N |
C |
S |
S |
F |
G |
S |
A |
I |
P |
S |
R |
G |
S |
F |
S |
Q |
I |
Y |
P |
S |
I |
N |
I |
S |
N |
L |
N |
Q |
P |
S |
S |
- |
- |
|
AT1G27660.1 |
M |
D |
D |
M |
S |
N |
I |
S |
R |
P |
F |
D |
I |
N |
M |
Q |
V |
F |
D |
- |
- |
- |
G |
R |
L |
F |
E |
G |
N |
V |
L |
V |
P |
P |
F |
N |
A |
Q |
E |
I |
S |
S |
L |
G |
M |
S |
R |
G |
S |
L |
P |
S |
F |
G |
L |
P |
F |
H |
H |
H |
pt000627_POPTR_ |
- |
- |
- |
- |
P |
L |
I |
S |
G |
S |
F |
D |
M |
N |
L |
Q |
A |
L |
D |
L |
L |
T |
S |
T |
R |
F |
S |
G |
S |
F |
P |
Q |
P |
- |
- |
- |
- |
A |
S |
L |
D |
P |
L |
D |
M |
F |
K |
D |
S |
L |
- |
S |
F |
G |
L |
- |
- |
- |
D |
S |
|
AT1G27660.1 |
L |
Q |
Q |
T |
L |
P |
H |
L |
S |
S |
S |
P |
T |
H |
Q |
M |
E |
M |
F |
S |
N |
E |
P |
Q |
T |
S |
E |
G |
K |
R |
- |
H |
N |
F |
L |
M |
A |
T |
K |
A |
G |
E |
N |
A |
S |
- |
K |
K |
P |
R |
V |
E |
S |
R |
S |
S |
C |
P |
P |
F |
pt000627_POPTR_ |
I |
Q |
Q |
S |
N |
Q |
R |
P |
S |
C |
S |
P |
S |
K |
- |
- |
- |
- |
I |
S |
S |
T |
N |
E |
I |
T |
E |
A |
K |
R |
P |
N |
N |
S |
M |
M |
E |
P |
K |
A |
T |
Q |
A |
A |
A |
P |
K |
K |
S |
R |
L |
E |
S |
R |
S |
P |
C |
P |
P |
F |
|
AT1G27660.1 |
K |
V |
R |
K |
E |
K |
L |
G |
D |
R |
I |
A |
A |
L |
Q |
Q |
L |
V |
S |
P |
F |
G |
K |
T |
D |
T |
A |
S |
V |
L |
M |
E |
A |
I |
G |
Y |
I |
K |
F |
L |
Q |
S |
Q |
I |
E |
T |
L |
S |
V |
P |
Y |
M |
R |
A |
S |
R |
N |
R |
P |
G |
pt000627_POPTR_ |
K |
V |
R |
K |
E |
K |
L |
G |
D |
R |
I |
A |
A |
L |
Q |
Q |
L |
V |
A |
P |
F |
G |
K |
T |
D |
T |
A |
S |
V |
L |
M |
E |
A |
I |
G |
Y |
I |
K |
F |
L |
Q |
N |
Q |
V |
E |
T |
L |
S |
V |
P |
Y |
M |
K |
S |
S |
R |
N |
K |
T |
S |
|
AT1G27660.1 |
K |
A |
S |
Q |
L |
V |
S |
Q |
S |
Q |
E |
G |
D |
E |
E |
E |
T |
R |
D |
L |
R |
S |
R |
G |
L |
C |
L |
V |
P |
L |
S |
C |
M |
T |
Y |
V |
T |
G |
D |
G |
G |
D |
G |
G |
G |
G |
V |
G |
T |
G |
F |
W |
P |
T |
P |
P |
G |
F |
G |
G |
pt000627_POPTR_ |
R |
S |
I |
Q |
A |
A |
S |
N |
S |
G |
- |
G |
D |
Q |
E |
S |
K |
R |
D |
L |
R |
S |
R |
G |
L |
C |
L |
V |
P |
L |
S |
C |
M |
S |
Y |
V |
T |
T |
D |
G |
- |
- |
G |
G |
G |
G |
I |
- |
- |
- |
- |
W |
P |
- |
P |
P |
N |
F |
G |
G |
|
AT1G27660.1 |
G |
T |
pt000627_POPTR_ |
G |
T |
|
|