fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G27660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000627 not found in 430aa AT1G27660.1 1st_1st 0.337317397 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G27660.1     MDSANL---HQLQDQLQLVGSSSSSSSLDNNSDPSCYG-ASSAHQWSPGGISLNSVSLSH
pt000627_POPTR_ MESANLHHQHQLQD--QFVGSSSLTT-----ATPSSYAEAGSARAWTQ-TITLNSDNSNP
                *:****   *****  *:***** ::     : **.*. *.**: *:   *:*** . . 

AT1G27660.1     NYNNEMLNTRAHNNNNNNNTSECMSLSSIHNHSLIQQQDFPLQWPHDQSSYQHHEG----
pt000627_POPTR_ SYNGVIFNQRQKNES---------PISSL-NSTMFQDLGFHY-WNNNAGNFSSHSAYDLQ
                .**. ::* * :*:.         .:**: * :::*: .*   * :: ..:. *..    

AT1G27660.1     LLKIKEELSSSTISDHQEGISKFTDMLNSPVIT---------NYLKINEHKD--YTEKLL
pt000627_POPTR_ LSKIKEGLSSS------DSFPKFTEMLNSPSSTIEDPHVSSSSYIK-DELKDLSLSEKLL
                * **** ****      :.:.***:*****  *         .*:* :* **   :****

AT1G27660.1     LKSMSSGFPING-DYGSSLPSSSS----SSSPSSQSHRGNFSQIYPSVNISSLSESRKMS
pt000627_POPTR_ LETISSGFPINGHDQFSPRQISSSHHNCSSFGSAIPSRGSFSQIYPSINISNLNQPSS--
                *:::******** *  *.   ***    **  *: . **.*******:***.*.:. .  

AT1G27660.1     MDDMSNISRPFDINMQVFD---GRLFEGNVLVPPFNAQEISSLGMSRGSLPSFGLPFHHH
pt000627_POPTR_ ----PLISGSFDMNLQALDLLTSTRFSGSFPQP----ASLDPLDMFKDSL-SFGL---DS
                    . ** .**:*:*.:*   .  *.*..  *     .:..*.* :.** ****   . 

AT1G27660.1     LQQTLPHLSSSPTHQMEMFSNEPQTSEGKR-HNFLMATKAGENAS-KKPRVESRSSCPPF
pt000627_POPTR_ IQQSNQRPSCSPSK----ISSTNEITEAKRPNNSMMEPKATQAAAPKKSRLESRSPCPPF
                :**:  : *.**::    :*.  : :*.** :* :* .** : *: **.*:****.****

AT1G27660.1     KVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPG
pt000627_POPTR_ KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKTS
                ******************:**********************.*:********::***:..

AT1G27660.1     KASQLVSQSQEGDEEETRDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGTGFWPTPPGFGG
pt000627_POPTR_ RSIQAASNSG-GDQESKRDLRSRGLCLVPLSCMSYVTTDG--GGGGI----WP-PPNFGG
                :: * .*:*  **:*..****************:*** **  ****:    ** **.***

AT1G27660.1     GT
pt000627_POPTR_ GT
                **
BoxShade v3.31 C (beta, 970507) Output
AT1G27660.1     M D S A N L - - - H Q L Q D Q L Q L V G S S S S S S S L D N N S D P S C Y G - A S S A H Q W S P G G I S L N S V S L S H
pt000627_POPTR_    M E S A N L H H Q H Q L Q D - - Q F V G S S S L T T - - - - - A T P S S Y A E A G S A R A W T Q - T I T L N S D N S N P
 
AT1G27660.1     N Y N N E M L N T R A H N N N N N N N T S E C M S L S S I H N H S L I Q Q Q D F P L Q W P H D Q S S Y Q H H E G - - - -
pt000627_POPTR_    S Y N G V I F N Q R Q K N E S - - - - - - - - - P I S S L - N S T M F Q D L G F H Y - W N N N A G N F S S H S A Y D L Q
 
AT1G27660.1     L L K I K E E L S S S T I S D H Q E G I S K F T D M L N S P V I T - - - - - - - - - N Y L K I N E H K D - - Y T E K L L
pt000627_POPTR_    L S K I K E G L S S S - - - - - - D S F P K F T E M L N S P S S T I E D P H V S S S S Y I K - D E L K D L S L S E K L L
 
AT1G27660.1     L K S M S S G F P I N G - D Y G S S L P S S S S - - - - S S S P S S Q S H R G N F S Q I Y P S V N I S S L S E S R K M S
pt000627_POPTR_    L E T I S S G F P I N G H D Q F S P R Q I S S S H H N C S S F G S A I P S R G S F S Q I Y P S I N I S N L N Q P S S - -
 
AT1G27660.1     M D D M S N I S R P F D I N M Q V F D - - - G R L F E G N V L V P P F N A Q E I S S L G M S R G S L P S F G L P F H H H
pt000627_POPTR_    - - - - P L I S G S F D M N L Q A L D L L T S T R F S G S F P Q P - - - - A S L D P L D M F K D S L - S F G L - - - D S
 
AT1G27660.1     L Q Q T L P H L S S S P T H Q M E M F S N E P Q T S E G K R - H N F L M A T K A G E N A S - K K P R V E S R S S C P P F
pt000627_POPTR_    I Q Q S N Q R P S C S P S K - - - - I S S T N E I T E A K R P N N S M M E P K A T Q A A A P K K S R L E S R S P C P P F
 
AT1G27660.1     K V R K E K L G D R I A A L Q Q L V S P F G K T D T A S V L M E A I G Y I K F L Q S Q I E T L S V P Y M R A S R N R P G
pt000627_POPTR_    K V R K E K L G D R I A A L Q Q L V A P F G K T D T A S V L M E A I G Y I K F L Q N Q V E T L S V P Y M K S S R N K T S
 
AT1G27660.1     K A S Q L V S Q S Q E G D E E E T R D L R S R G L C L V P L S C M T Y V T G D G G D G G G G V G T G F W P T P P G F G G
pt000627_POPTR_    R S I Q A A S N S G - G D Q E S K R D L R S R G L C L V P L S C M S Y V T T D G - - G G G G I - - - - W P - P P N F G G
 
AT1G27660.1     G T
pt000627_POPTR_    G T
 
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