fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G27660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007547 not found in 181aa AT1G27660.1 1st_1st 0.203187250 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G27660.1     MDSANLHQLQDQLQLVGSSSSSSSLDNNSDPSCYGASSAHQWSPGGISLNSVSLSHNYNN
Sb007547_Sorbi1 -----------------MGASSSCVD--------AAGGGRHWSA----------------
                                  .:***.:*        .*...::**.                

AT1G27660.1     EMLNTRAHNNNNNNNTSECMSLSSIHNHSLIQQQDFPLQWPHDQSSYQHHEGLLKIKEEL
Sb007547_Sorbi1 ------------------------------------------------------------
                                                                            

AT1G27660.1     SSSTISDHQEGISKFTDMLNSPVITNYLKINEHKDYTEKLLLKSMSSGFPINGDYGSSLP
Sb007547_Sorbi1 -------------------------------EHDAACQSRAAAAAAAARPV---------
                                               **.   :.    : ::. *:         

AT1G27660.1     SSSSSSSPSSQSHRGNFSQIYPSVNISSLSESRKMSMDDMSNISRPFDINMQVFDGRLFE
Sb007547_Sorbi1 -------PSSQ-------------------------------------------------
                       ****                                                 

AT1G27660.1     GNVLVPPFNAQEISSLGMSRGSLPSFGLPFHHHLQQTLPHLSSSPTHQMEMFSNEPQTSE
Sb007547_Sorbi1 ---LAP------------------------------------------------------
                   *.*                                                      

AT1G27660.1     GKRHNFLMATKAGENASKKPRVESRSS-----CPPFKVRKEKLGDRIAALQQLVSPFGKT
Sb007547_Sorbi1 ---------------SSKKPRVEQRSSSSTTIVPSFKVRKEKLGDRIAALQQLVSPFGKT
                               :*******.***      *.*************************

AT1G27660.1     DTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQ--LVSQSQEGDEEETR-DLR
Sb007547_Sorbi1 DTASVLMEAIGYIKFLQDQVETLSRPYLKSSRSKKPKPTQRGCSNANAAGEQEETRLDLR
                *****************.*:**** **:::**.:  *.:*    . .  *::**** ***

AT1G27660.1     SRGLCLVPLSCMTYVTGDGGDGGGGVGTGFWPTPPGFGGGT
Sb007547_Sorbi1 SRGLCLVPLSCTSYVTNE---------NGVW-VPPNFRGN-
                *********** :***.:         .*.* .**.* *.
BoxShade v3.31 C (beta, 970507) Output
AT1G27660.1     M D S A N L H Q L Q D Q L Q L V G S S S S S S S L D N N S D P S C Y G A S S A H Q W S P G G I S L N S V S L S H N Y N N
Sb007547_Sorbi1    - - - - - - - - - - - - - - - - - M G A S S S C V D - - - - - - - - A A G G G R H W S A - - - - - - - - - - - - - - - -
 
AT1G27660.1     E M L N T R A H N N N N N N N T S E C M S L S S I H N H S L I Q Q Q D F P L Q W P H D Q S S Y Q H H E G L L K I K E E L
Sb007547_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G27660.1     S S S T I S D H Q E G I S K F T D M L N S P V I T N Y L K I N E H K D Y T E K L L L K S M S S G F P I N G D Y G S S L P
Sb007547_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E H D A A C Q S R A A A A A A A A R P V - - - - - - - - -
 
AT1G27660.1     S S S S S S S P S S Q S H R G N F S Q I Y P S V N I S S L S E S R K M S M D D M S N I S R P F D I N M Q V F D G R L F E
Sb007547_Sorbi1    - - - - - - - P S S Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G27660.1     G N V L V P P F N A Q E I S S L G M S R G S L P S F G L P F H H H L Q Q T L P H L S S S P T H Q M E M F S N E P Q T S E
Sb007547_Sorbi1    - - - L A P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G27660.1     G K R H N F L M A T K A G E N A S K K P R V E S R S S - - - - - C P P F K V R K E K L G D R I A A L Q Q L V S P F G K T
Sb007547_Sorbi1    - - - - - - - - - - - - - - - S S K K P R V E Q R S S S S T T I V P S F K V R K E K L G D R I A A L Q Q L V S P F G K T
 
AT1G27660.1     D T A S V L M E A I G Y I K F L Q S Q I E T L S V P Y M R A S R N R P G K A S Q - - L V S Q S Q E G D E E E T R - D L R
Sb007547_Sorbi1    D T A S V L M E A I G Y I K F L Q D Q V E T L S R P Y L K S S R S K K P K P T Q R G C S N A N A A G E Q E E T R L D L R
 
AT1G27660.1     S R G L C L V P L S C M T Y V T G D G G D G G G G V G T G F W P T P P G F G G G T
Sb007547_Sorbi1    S R G L C L V P L S C T S Y V T N E - - - - - - - - - N G V W - V P P N F R G N -
 
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