fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G27660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044638 not found in 198aa AT1G27660.1 1st_1st 0.177954847 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G27660.1     MDSANLHQLQDQLQLVGSSSSSSSLDNNSD----PSCYGASSAHQWSPG----GISLNSV
gm044638_Glyma1 ---------------MASSLVSCSLGLNPKMFDLHTSYGGSCGIQ--PGYDTFGIN-ESI
                               :.**  *.**. *..     :.**.*.. *  **    **. :*:

AT1G27660.1     SLSHNYNNEMLNTRAHNNNNNNNTSECMSLSSIHNHSLIQQQDFPLQWPHDQSSYQHHEG
gm044638_Glyma1 SLSHSYE--------HGRENS---------------------------------------
                ****.*:        *..:*.                                       

AT1G27660.1     LLKIKEELSSSTISDHQEGISKFTDMLNSPVITNYLKINEHKDYTEKLLLKSMSSGFPIN
gm044638_Glyma1 ------------------------------------------------------------
                                                                            

AT1G27660.1     GDYGSSLPSSSSSSSPSSQSHRGNFSQIYPSVNISSLSESRKMSMDDMSNISRPFDINMQ
gm044638_Glyma1 -------PSNSTS-------------------KISSF-------VSEVATTKRPSN----
                       **.*:*                   :***:       :.:::. .** :    

AT1G27660.1     VFDGRLFEGNVLVPPFNAQEISSLGMSRGSLPSFGLPFHHHLQQTLPHLSSSPTHQMEMF
gm044638_Glyma1 --------------------------------------------------CSP-------
                                                                  .**       

AT1G27660.1     SNEPQTSEGKRHNFLMATKAGENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPF
gm044638_Glyma1 ---PKESEAK--------------AKK----SRPSCPPLKVRKEKLGDRIQTLQRLVAPF
                   *: **.*              :**    **.****:*********** :**:**:**

AT1G27660.1     GKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETR-DL
gm044638_Glyma1 GKTSTASVLSEAIGYIHFLHQQIQTLSIPYMKSAQSKPSRVVQL--DSNKVDRREFKPDL
                ***.***** ******:**:.**:***:***::::.:*.:. **  :*:: *..* : **

AT1G27660.1     RSRGLCLVPLSCMTYVTGDGGDGGGGVGTGFWPTPPGFGGGT
gm044638_Glyma1 RSRGLCLVPLSYASFIHRCV----------------------
                ***********  :::
BoxShade v3.31 C (beta, 970507) Output
AT1G27660.1     M D S A N L H Q L Q D Q L Q L V G S S S S S S S L D N N S D - - - - P S C Y G A S S A H Q W S P G - - - - G I S L N S V
gm044638_Glyma1    - - - - - - - - - - - - - - - M A S S L V S C S L G L N P K M F D L H T S Y G G S C G I Q - - P G Y D T F G I N - E S I
 
AT1G27660.1     S L S H N Y N N E M L N T R A H N N N N N N N T S E C M S L S S I H N H S L I Q Q Q D F P L Q W P H D Q S S Y Q H H E G
gm044638_Glyma1    S L S H S Y E - - - - - - - - H G R E N S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G27660.1     L L K I K E E L S S S T I S D H Q E G I S K F T D M L N S P V I T N Y L K I N E H K D Y T E K L L L K S M S S G F P I N
gm044638_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G27660.1     G D Y G S S L P S S S S S S S P S S Q S H R G N F S Q I Y P S V N I S S L S E S R K M S M D D M S N I S R P F D I N M Q
gm044638_Glyma1    - - - - - - - P S N S T S - - - - - - - - - - - - - - - - - - - K I S S F - - - - - - - V S E V A T T K R P S N - - - -
 
AT1G27660.1     V F D G R L F E G N V L V P P F N A Q E I S S L G M S R G S L P S F G L P F H H H L Q Q T L P H L S S S P T H Q M E M F
gm044638_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C S P - - - - - - -
 
AT1G27660.1     S N E P Q T S E G K R H N F L M A T K A G E N A S K K P R V E S R S S C P P F K V R K E K L G D R I A A L Q Q L V S P F
gm044638_Glyma1    - - - P K E S E A K - - - - - - - - - - - - - - A K K - - - - S R P S C P P L K V R K E K L G D R I Q T L Q R L V A P F
 
AT1G27660.1     G K T D T A S V L M E A I G Y I K F L Q S Q I E T L S V P Y M R A S R N R P G K A S Q L V S Q S Q E G D E E E T R - D L
gm044638_Glyma1    G K T S T A S V L S E A I G Y I H F L H Q Q I Q T L S I P Y M K S A Q S K P S R V V Q L - - D S N K V D R R E F K P D L
 
AT1G27660.1     R S R G L C L V P L S C M T Y V T G D G G D G G G G V G T G F W P T P P G F G G G T
gm044638_Glyma1    R S R G L C L V P L S Y A S F I H R C V - - - - - - - - - - - - - - - - - - - - - -
 
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