fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G27730.1 SSHRGFDLNIPPIPEFS at 188/227 in AT1G27730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008898 not found in 233aa AT1G27730.1 1st_1st 0.494871794 Ia
Pt017464 not found in 238aa AT1G27730.1 1st_1st 0.492307692 Ia
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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G27730.1     MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKRSRSDFH--HQNLTEEEYLAFC
pt017464_POPTR_ MALEALNSPTTAPPSFQ-FEDLSLPCAGEPWVKRKRSKRPRLDHQ-----PTEEEYLALC
gm008898_Glyma0 MALEALQSPRTATPSFSPFEETNLSYLETPWTKGKRSKRSRMEQQLQHSSCTEEEYLALC
                ****** **  *.*    **: .:      *.* *****.* : :      *******:*

AT1G27730.1     LMLLARDNRQPPPPPAV------------EKLSYKCSVCDKTFSSYQALGGHKASHRKNL
pt017464_POPTR_ LVMLARGHQKSLTPSTVFTSSE-------LKNSYKCSVCNKEFPSYQALGGHKASHRK--
gm008898_Glyma0 LIMLAHGGAGGVPAAKPAVSDNNSAPLPAAKLSYKCSVCNKAFSSYQALGGHKASHRK--
                *::**:.     ...               * *******:* *.**************  

AT1G27730.1     SQTLSGGGDDHSTSSATT-----TSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYEG
pt017464_POPTR_ ---LAGGGEDQTTSSTTTSAITATKTVSNGSGKTHECSICHKTFPTGQALGGHKRCHYEG
gm008898_Glyma0 ---L--GGEHHSTSSAVT-----TSSASNGGARTHECSICQKTFPTGQALGGHKRCHYEG
                   *  **:.::***:.*     *.:.:.*..::* *:**:*:**:**************

AT1G27730.1     ----NNNINTSSVSNSEGAGSTSHVSSSHRGFDLNIPPIPEFS---MVNGDDEVMSPMP-
pt017464_POPTR_ IIGGGEKSGVTSTSESAGSTNTR--THSHNEFDLNIPALPEFSSCFSVSGEDEVMSPLPA
gm008898_Glyma0 --------GNSAVTASEGVGSTH--TGSHRDFDLNLPAFPDFSTRFFV--DDEVTSPHP-
                        . ::.: * *  .*   : **. ****:*.:*:**    *  :*** ** * 

AT1G27730.1     AKKPRFDFP-VKLQL----
pt017464_POPTR_ AKKLRISMP-PRFEVSQAQ
gm008898_Glyma0 SKKSRLNLTIPKIEIPQY-
                :** *:.:.  ::::
BoxShade v3.31 C (beta, 970507) Output
AT1G27730.1     M A L E A L T S P R L A S P I P P L F E D S S V F H G V E H W T K G K R S K R S R S D F H - - H Q N L T E E E Y L A F C
pt017464_POPTR_    M A L E A L N S P T T A P P S F Q - F E D L S L P C A G E P W V K R K R S K R P R L D H Q - - - - - P T E E E Y L A L C
gm008898_Glyma0    M A L E A L Q S P R T A T P S F S P F E E T N L S Y L E T P W T K G K R S K R S R M E Q Q L Q H S S C T E E E Y L A L C
 
AT1G27730.1     L M L L A R D N R Q P P P P P A V - - - - - - - - - - - - E K L S Y K C S V C D K T F S S Y Q A L G G H K A S H R K N L
pt017464_POPTR_    L V M L A R G H Q K S L T P S T V F T S S E - - - - - - - L K N S Y K C S V C N K E F P S Y Q A L G G H K A S H R K - -
gm008898_Glyma0    L I M L A H G G A G G V P A A K P A V S D N N S A P L P A A K L S Y K C S V C N K A F S S Y Q A L G G H K A S H R K - -
 
AT1G27730.1     S Q T L S G G G D D H S T S S A T T - - - - - T S A V T T G S G K S H V C T I C N K S F P S G Q A L G G H K R C H Y E G
pt017464_POPTR_    - - - L A G G G E D Q T T S S T T T S A I T A T K T V S N G S G K T H E C S I C H K T F P T G Q A L G G H K R C H Y E G
gm008898_Glyma0    - - - L - - G G E H H S T S S A V T - - - - - T S S A S N G G A R T H E C S I C Q K T F P T G Q A L G G H K R C H Y E G
 
AT1G27730.1     - - - - N N N I N T S S V S N S E G A G S T S H V S S S H R G F D L N I P P I P E F S - - - M V N G D D E V M S P M P -
pt017464_POPTR_    I I G G G E K S G V T S T S E S A G S T N T R - - T H S H N E F D L N I P A L P E F S S C F S V S G E D E V M S P L P A
gm008898_Glyma0    - - - - - - - - G N S A V T A S E G V G S T H - - T G S H R D F D L N L P A F P D F S T R F F V - - D D E V T S P H P -
 
AT1G27730.1     A K K P R F D F P - V K L Q L - - - -
pt017464_POPTR_    A K K L R I S M P - P R F E V S Q A Q
gm008898_Glyma0    S K K S R L N L T I P K I E I P Q Y -
 
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