Input
| Putative repression domain
|
|
AT1G27730.1 |
SSHRGFDLNIPPIPEFS at 188/227 in AT1G27730.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm014082 |
not found in 233aa |
AT1G27730.1 |
not_1st |
0.489743589 |
II |
Gm047952 |
not found in 240aa |
AT1G27730.1 |
not_1st |
0.466666666 |
II |
Gm039438 |
not found in 233aa |
AT1G27730.1 |
not_1st |
0.458974358 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G27730.1 MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKR-SRSD--FHHQNLTEEEYLAF
gm039438_Glyma1 MALETLNSPTTTAPSF-PFDDPTI-----PWAKRKRSKRCSR-----DHPS--EEEYLAL
gm047952_Glyma1 MALEALNSPTTTAPSF-PFDDPTI-----PWAKRKRSKR-SR-----DHPS--EEEYLAL
gm014082_Glyma0 MALEALQSPTTATPSFSPFEETSLSYLETPWTKGKRSKR-SRTEQQLQHPSCTEEEYLAL
****:* ** ::* *::.:: *:* ***** ** .* . ******:
AT1G27730.1 CLMLLAR------DNR--QPPP--------PPAVEKLSYKCSVCDKTFSSYQALGGHKAS
gm039438_Glyma1 CLIMLARGGTT----RRVSTPP----PQPTPDPSTKLSYKCSVCNKSFPSYQALGGHKAS
gm047952_Glyma1 CLIMLARGGTTTVNNRHVSPPPPQPQPQPTPDPSTKLSYKCSVCDKSFPSYQALGGHKAS
gm014082_Glyma0 CLIMLARGGAGSVS----TAKPAVSDNNSAPLSAAKLSYKCSVCNKAFSSYQALGGHKAS
**::*** . * * . *********:*:*.***********
AT1G27730.1 HRKNLSQTLSG-GGDDHS---TSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRC
gm039438_Glyma1 HRK-----LAASGGEDQPTTTSSAASSANTAS--GGRTHECSICHKSFPTGQALGGHKRC
gm047952_Glyma1 HRK-----LAGAAEDQPPSTTTSSAAATSSAS--GGKAHECSICHKSFPTGQALGGHKRC
gm014082_Glyma0 HRK-----LAG---ENHP---TSSAVTTSSASNGGGRTHECSICHKTFSTGQALGGHKRC
*** *:. :: . :*:* ::.:.: .*::* *:**:*:*.:**********
AT1G27730.1 HYEG----NNNINTSSVS-NSEGAGSTSHVS-SSHRGFDLNIPPIPEFSMVNG-DDEVMS
gm039438_Glyma1 HYEGNSNGNNNNSNSSVTAASEGVGSTHTVSHGHHRDFDLNIPAFPDFSTKVG-EDEVES
gm047952_Glyma1 HYEGNGNGNNNNSNSVVTVASEGVGSTHTVSHGHHRDFDLNIPAFPDFSTKVG-EDEVES
gm014082_Glyma0 HYEG--------GNSAVT-ASEGVGSTHT---GSHRDFDLNLPAFPDFSARFFVDDEVTS
**** ..* *: ***.*** . **.****:*.:*:** :*** *
AT1G27730.1 PMPAKKPRFDFPV-KLQL----
gm039438_Glyma1 PHPVMKKPRPFVIPKIEIPQYQ
gm047952_Glyma1 PHPVMKKPRLFVIPKIEIPQFQ
gm014082_Glyma0 PHPSKKSRFNLTIPKIEIPQY-
* * * : : *:::
BoxShade v3.31 C (beta, 970507) Output
AT1G27730.1 |
M |
A |
L |
E |
A |
L |
T |
S |
P |
R |
L |
A |
S |
P |
I |
P |
P |
L |
F |
E |
D |
S |
S |
V |
F |
H |
G |
V |
E |
H |
W |
T |
K |
G |
K |
R |
S |
K |
R |
- |
S |
R |
S |
D |
- |
- |
F |
H |
H |
Q |
N |
L |
T |
E |
E |
E |
Y |
L |
A |
F |
gm039438_Glyma1 |
M |
A |
L |
E |
T |
L |
N |
S |
P |
T |
T |
T |
A |
P |
S |
F |
- |
P |
F |
D |
D |
P |
T |
I |
- |
- |
- |
- |
- |
P |
W |
A |
K |
R |
K |
R |
S |
K |
R |
C |
S |
R |
- |
- |
- |
- |
- |
D |
H |
P |
S |
- |
- |
E |
E |
E |
Y |
L |
A |
L |
gm047952_Glyma1 |
M |
A |
L |
E |
A |
L |
N |
S |
P |
T |
T |
T |
A |
P |
S |
F |
- |
P |
F |
D |
D |
P |
T |
I |
- |
- |
- |
- |
- |
P |
W |
A |
K |
R |
K |
R |
S |
K |
R |
- |
S |
R |
- |
- |
- |
- |
- |
D |
H |
P |
S |
- |
- |
E |
E |
E |
Y |
L |
A |
L |
gm014082_Glyma0 |
M |
A |
L |
E |
A |
L |
Q |
S |
P |
T |
T |
A |
T |
P |
S |
F |
S |
P |
F |
E |
E |
T |
S |
L |
S |
Y |
L |
E |
T |
P |
W |
T |
K |
G |
K |
R |
S |
K |
R |
- |
S |
R |
T |
E |
Q |
Q |
L |
Q |
H |
P |
S |
C |
T |
E |
E |
E |
Y |
L |
A |
L |
|
AT1G27730.1 |
C |
L |
M |
L |
L |
A |
R |
- |
- |
- |
- |
- |
- |
D |
N |
R |
- |
- |
Q |
P |
P |
P |
- |
- |
- |
- |
- |
- |
- |
- |
P |
P |
A |
V |
E |
K |
L |
S |
Y |
K |
C |
S |
V |
C |
D |
K |
T |
F |
S |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
gm039438_Glyma1 |
C |
L |
I |
M |
L |
A |
R |
G |
G |
T |
T |
- |
- |
- |
- |
R |
R |
V |
S |
T |
P |
P |
- |
- |
- |
- |
P |
Q |
P |
T |
P |
D |
P |
S |
T |
K |
L |
S |
Y |
K |
C |
S |
V |
C |
N |
K |
S |
F |
P |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
gm047952_Glyma1 |
C |
L |
I |
M |
L |
A |
R |
G |
G |
T |
T |
T |
V |
N |
N |
R |
H |
V |
S |
P |
P |
P |
P |
Q |
P |
Q |
P |
Q |
P |
T |
P |
D |
P |
S |
T |
K |
L |
S |
Y |
K |
C |
S |
V |
C |
D |
K |
S |
F |
P |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
gm014082_Glyma0 |
C |
L |
I |
M |
L |
A |
R |
G |
G |
A |
G |
S |
V |
S |
- |
- |
- |
- |
T |
A |
K |
P |
A |
V |
S |
D |
N |
N |
S |
A |
P |
L |
S |
A |
A |
K |
L |
S |
Y |
K |
C |
S |
V |
C |
N |
K |
A |
F |
S |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
|
AT1G27730.1 |
H |
R |
K |
N |
L |
S |
Q |
T |
L |
S |
G |
- |
G |
G |
D |
D |
H |
S |
- |
- |
- |
T |
S |
S |
A |
T |
T |
T |
S |
A |
V |
T |
T |
G |
S |
G |
K |
S |
H |
V |
C |
T |
I |
C |
N |
K |
S |
F |
P |
S |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
gm039438_Glyma1 |
H |
R |
K |
- |
- |
- |
- |
- |
L |
A |
A |
S |
G |
G |
E |
D |
Q |
P |
T |
T |
T |
S |
S |
A |
A |
S |
S |
A |
N |
T |
A |
S |
- |
- |
G |
G |
R |
T |
H |
E |
C |
S |
I |
C |
H |
K |
S |
F |
P |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
gm047952_Glyma1 |
H |
R |
K |
- |
- |
- |
- |
- |
L |
A |
G |
A |
A |
E |
D |
Q |
P |
P |
S |
T |
T |
T |
S |
S |
A |
A |
A |
T |
S |
S |
A |
S |
- |
- |
G |
G |
K |
A |
H |
E |
C |
S |
I |
C |
H |
K |
S |
F |
P |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
gm014082_Glyma0 |
H |
R |
K |
- |
- |
- |
- |
- |
L |
A |
G |
- |
- |
- |
E |
N |
H |
P |
- |
- |
- |
T |
S |
S |
A |
V |
T |
T |
S |
S |
A |
S |
N |
G |
G |
G |
R |
T |
H |
E |
C |
S |
I |
C |
H |
K |
T |
F |
S |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
|
AT1G27730.1 |
H |
Y |
E |
G |
- |
- |
- |
- |
N |
N |
N |
I |
N |
T |
S |
S |
V |
S |
- |
N |
S |
E |
G |
A |
G |
S |
T |
S |
H |
V |
S |
- |
S |
S |
H |
R |
G |
F |
D |
L |
N |
I |
P |
P |
I |
P |
E |
F |
S |
M |
V |
N |
G |
- |
D |
D |
E |
V |
M |
S |
gm039438_Glyma1 |
H |
Y |
E |
G |
N |
S |
N |
G |
N |
N |
N |
N |
S |
N |
S |
S |
V |
T |
A |
A |
S |
E |
G |
V |
G |
S |
T |
H |
T |
V |
S |
H |
G |
H |
H |
R |
D |
F |
D |
L |
N |
I |
P |
A |
F |
P |
D |
F |
S |
T |
K |
V |
G |
- |
E |
D |
E |
V |
E |
S |
gm047952_Glyma1 |
H |
Y |
E |
G |
N |
G |
N |
G |
N |
N |
N |
N |
S |
N |
S |
V |
V |
T |
V |
A |
S |
E |
G |
V |
G |
S |
T |
H |
T |
V |
S |
H |
G |
H |
H |
R |
D |
F |
D |
L |
N |
I |
P |
A |
F |
P |
D |
F |
S |
T |
K |
V |
G |
- |
E |
D |
E |
V |
E |
S |
gm014082_Glyma0 |
H |
Y |
E |
G |
- |
- |
- |
- |
- |
- |
- |
- |
G |
N |
S |
A |
V |
T |
- |
A |
S |
E |
G |
V |
G |
S |
T |
H |
T |
- |
- |
- |
G |
S |
H |
R |
D |
F |
D |
L |
N |
L |
P |
A |
F |
P |
D |
F |
S |
A |
R |
F |
F |
V |
D |
D |
E |
V |
T |
S |
|
AT1G27730.1 |
P |
M |
P |
A |
K |
K |
P |
R |
F |
D |
F |
P |
V |
- |
K |
L |
Q |
L |
- |
- |
- |
- |
gm039438_Glyma1 |
P |
H |
P |
V |
M |
K |
K |
P |
R |
P |
F |
V |
I |
P |
K |
I |
E |
I |
P |
Q |
Y |
Q |
gm047952_Glyma1 |
P |
H |
P |
V |
M |
K |
K |
P |
R |
L |
F |
V |
I |
P |
K |
I |
E |
I |
P |
Q |
F |
Q |
gm014082_Glyma0 |
P |
H |
P |
S |
K |
K |
S |
R |
F |
N |
L |
T |
I |
P |
K |
I |
E |
I |
P |
Q |
Y |
- |
|
|