fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G27730.1 SSHRGFDLNIPPIPEFS at 188/227 in AT1G27730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008898 not found in 233aa AT1G27730.1 1st_1st 0.494871794 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G27730.1     MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKRSRSD--FHHQNLTEEEYLAFC
gm008898_Glyma0 MALEALQSPRTATPSFSPFEETNLSYLETPWTKGKRSKRSRMEQQLQHSSCTEEEYLALC
                ****** *** *:*  . **::.: :    *********** :  ::*.. *******:*

AT1G27730.1     LMLLAR--------------DNRQPPPPPAVEKLSYKCSVCDKTFSSYQALGGHKASHRK
gm008898_Glyma0 LIMLAHGGAGGVPAAKPAVSDNNSAPLPAA--KLSYKCSVCNKAFSSYQALGGHKASHRK
                *::**:              **...* *.*  *********:*:****************

AT1G27730.1     NLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYEGNNN
gm008898_Glyma0 L-------GGEHHSTSSAVTTSSASNGGARTHECSICQKTFPTGQALGGHKRCHYEGGN-
                        **:.******.***:.:.*..::* *:**:*:**:**************.* 

AT1G27730.1     INTSSVSNSEGAGSTSHVSSSHRGFDLNIPPIPEFS---MVNGDDEVMSPMPAKKPRFDF
gm008898_Glyma0 ---SAVTASEGVGSTH--TGSHRDFDLNLPAFPDFSTRFFV--DDEVTSPHPSKKSRLNL
                   *:*: ***.***   :.***.****:*.:*:**   :*  **** ** *:**.*:::

AT1G27730.1     PV-KLQL---
gm008898_Glyma0 TIPKIEIPQY
                .: *:::
BoxShade v3.31 C (beta, 970507) Output
AT1G27730.1     M A L E A L T S P R L A S P I P P L F E D S S V F H G V E H W T K G K R S K R S R S D - - F H H Q N L T E E E Y L A F C
gm008898_Glyma0    M A L E A L Q S P R T A T P S F S P F E E T N L S Y L E T P W T K G K R S K R S R M E Q Q L Q H S S C T E E E Y L A L C
 
AT1G27730.1     L M L L A R - - - - - - - - - - - - - - D N R Q P P P P P A V E K L S Y K C S V C D K T F S S Y Q A L G G H K A S H R K
gm008898_Glyma0    L I M L A H G G A G G V P A A K P A V S D N N S A P L P A A - - K L S Y K C S V C N K A F S S Y Q A L G G H K A S H R K
 
AT1G27730.1     N L S Q T L S G G G D D H S T S S A T T T S A V T T G S G K S H V C T I C N K S F P S G Q A L G G H K R C H Y E G N N N
gm008898_Glyma0    L - - - - - - - G G E H H S T S S A V T T S S A S N G G A R T H E C S I C Q K T F P T G Q A L G G H K R C H Y E G G N -
 
AT1G27730.1     I N T S S V S N S E G A G S T S H V S S S H R G F D L N I P P I P E F S - - - M V N G D D E V M S P M P A K K P R F D F
gm008898_Glyma0    - - - S A V T A S E G V G S T H - - T G S H R D F D L N L P A F P D F S T R F F V - - D D E V T S P H P S K K S R L N L
 
AT1G27730.1     P V - K L Q L - - -
gm008898_Glyma0    T I P K I E I P Q Y
 
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