fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G27730.1 SSHRGFDLNIPPIPEFS at 188/227 in AT1G27730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008898 not found in 233aa AT1G27730.1 1st_1st 0.494871794 Ia
Gm014082 not found in 233aa AT1G27730.1 not_1st 0.489743589 II
Gm047952 not found in 240aa AT1G27730.1 not_1st 0.466666666 II
Gm039438 not found in 233aa AT1G27730.1 not_1st 0.458974358 II
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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G27730.1     MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKR-SR--SDFHHQNLTEEEYLAF
gm008898_Glyma0 MALEALQSPRTATPSFSPFEETNLSYLETPWTKGKRSKR-SRMEQQLQHSSCTEEEYLAL
gm039438_Glyma1 MALETLNSPTTTAPSF-PFDDPTI-----PWAKRKRSKRCSR-----DHPS--EEEYLAL
gm047952_Glyma1 MALEALNSPTTTAPSF-PFDDPTI-----PWAKRKRSKR-SR-----DHPS--EEEYLAL
gm014082_Glyma0 MALEALQSPTTATPSFSPFEETSLSYLETPWTKGKRSKR-SRTEQQLQHPSCTEEEYLAL
                ****:* **  ::*    *::..:      *:* ***** **     .* .  ******:

AT1G27730.1     CLMLLARDN------R--QPPP--------PPAVEKLSYKCSVCDKTFSSYQALGGHKAS
gm008898_Glyma0 CLIMLAHGGAGGVP----AAKPAVSDNNSAPLPAAKLSYKCSVCNKAFSSYQALGGHKAS
gm039438_Glyma1 CLIMLARGGTT----RRVSTPP----PQPTPDPSTKLSYKCSVCNKSFPSYQALGGHKAS
gm047952_Glyma1 CLIMLARGGTTTVNNRHVSPPPPQPQPQPTPDPSTKLSYKCSVCDKSFPSYQALGGHKAS
gm014082_Glyma0 CLIMLARGGAGSVS----TAKPAVSDNNSAPLSAAKLSYKCSVCNKAFSSYQALGGHKAS
                **::**:..          . *        * .  *********:*:*.***********

AT1G27730.1     HRKNLSQTLSGGGDDHSTSSATTTSAVTT----GSGKSHVCTICNKSFPSGQALGGHKRC
gm008898_Glyma0 HRKL-------GGEHHSTSSAVTTSSASN----GGARTHECSICQKTFPTGQALGGHKRC
gm039438_Glyma1 HRKL-------AASGGEDQPTTTSSAASSANTASGGRTHECSICHKSFPTGQALGGHKRC
gm047952_Glyma1 HRKL-------AGAAEDQPPSTTTSSAAATSSASGGKAHECSICHKSFPTGQALGGHKRC
gm014082_Glyma0 HRKL-------AGENHPTSSAVTTSSASN----GGGRTHECSICHKTFSTGQALGGHKRC
                ***        ..      .:.*:*:.:     ...::* *:**:*:*.:**********

AT1G27730.1     HYEG----NNNINTSSVS-NSEGAGSTSHVS-SSHRGFDLNIPPIPEFSMVNG-DDEVMS
gm008898_Glyma0 HYEG--------GNSAVT-ASEGVGSTHT---GSHRDFDLNLPAFPDFSTRFFVDDEVTS
gm039438_Glyma1 HYEGNSNGNNNNSNSSVTAASEGVGSTHTVSHGHHRDFDLNIPAFPDFSTKVG-EDEVES
gm047952_Glyma1 HYEGNGNGNNNNSNSVVTVASEGVGSTHTVSHGHHRDFDLNIPAFPDFSTKVG-EDEVES
gm014082_Glyma0 HYEG--------GNSAVT-ASEGVGSTHT---GSHRDFDLNLPAFPDFSARFFVDDEVTS
                ****        ..* *:  ***.***     . **.****:*.:*:**     :*** *

AT1G27730.1     PMPAKKPRFDFPV-KLQL----
gm008898_Glyma0 PHPSKKSRLNLTIPKIEIPQY-
gm039438_Glyma1 PHPVMKKPRPFVIPKIEIPQYQ
gm047952_Glyma1 PHPVMKKPRLFVIPKIEIPQFQ
gm014082_Glyma0 PHPSKKSRFNLTIPKIEIPQY-
                * *  *    : : *:::
BoxShade v3.31 C (beta, 970507) Output
AT1G27730.1     M A L E A L T S P R L A S P I P P L F E D S S V F H G V E H W T K G K R S K R - S R - - S D F H H Q N L T E E E Y L A F
gm008898_Glyma0    M A L E A L Q S P R T A T P S F S P F E E T N L S Y L E T P W T K G K R S K R - S R M E Q Q L Q H S S C T E E E Y L A L
gm039438_Glyma1    M A L E T L N S P T T T A P S F - P F D D P T I - - - - - P W A K R K R S K R C S R - - - - - D H P S - - E E E Y L A L
gm047952_Glyma1    M A L E A L N S P T T T A P S F - P F D D P T I - - - - - P W A K R K R S K R - S R - - - - - D H P S - - E E E Y L A L
gm014082_Glyma0    M A L E A L Q S P T T A T P S F S P F E E T S L S Y L E T P W T K G K R S K R - S R T E Q Q L Q H P S C T E E E Y L A L
 
AT1G27730.1     C L M L L A R D N - - - - - - R - - Q P P P - - - - - - - - P P A V E K L S Y K C S V C D K T F S S Y Q A L G G H K A S
gm008898_Glyma0    C L I M L A H G G A G G V P - - - - A A K P A V S D N N S A P L P A A K L S Y K C S V C N K A F S S Y Q A L G G H K A S
gm039438_Glyma1    C L I M L A R G G T T - - - - R R V S T P P - - - - P Q P T P D P S T K L S Y K C S V C N K S F P S Y Q A L G G H K A S
gm047952_Glyma1    C L I M L A R G G T T T V N N R H V S P P P P Q P Q P Q P T P D P S T K L S Y K C S V C D K S F P S Y Q A L G G H K A S
gm014082_Glyma0    C L I M L A R G G A G S V S - - - - T A K P A V S D N N S A P L S A A K L S Y K C S V C N K A F S S Y Q A L G G H K A S
 
AT1G27730.1     H R K N L S Q T L S G G G D D H S T S S A T T T S A V T T - - - - G S G K S H V C T I C N K S F P S G Q A L G G H K R C
gm008898_Glyma0    H R K L - - - - - - - G G E H H S T S S A V T T S S A S N - - - - G G A R T H E C S I C Q K T F P T G Q A L G G H K R C
gm039438_Glyma1    H R K L - - - - - - - A A S G G E D Q P T T T S S A A S S A N T A S G G R T H E C S I C H K S F P T G Q A L G G H K R C
gm047952_Glyma1    H R K L - - - - - - - A G A A E D Q P P S T T T S S A A A T S S A S G G K A H E C S I C H K S F P T G Q A L G G H K R C
gm014082_Glyma0    H R K L - - - - - - - A G E N H P T S S A V T T S S A S N - - - - G G G R T H E C S I C H K T F S T G Q A L G G H K R C
 
AT1G27730.1     H Y E G - - - - N N N I N T S S V S - N S E G A G S T S H V S - S S H R G F D L N I P P I P E F S M V N G - D D E V M S
gm008898_Glyma0    H Y E G - - - - - - - - G N S A V T - A S E G V G S T H T - - - G S H R D F D L N L P A F P D F S T R F F V D D E V T S
gm039438_Glyma1    H Y E G N S N G N N N N S N S S V T A A S E G V G S T H T V S H G H H R D F D L N I P A F P D F S T K V G - E D E V E S
gm047952_Glyma1    H Y E G N G N G N N N N S N S V V T V A S E G V G S T H T V S H G H H R D F D L N I P A F P D F S T K V G - E D E V E S
gm014082_Glyma0    H Y E G - - - - - - - - G N S A V T - A S E G V G S T H T - - - G S H R D F D L N L P A F P D F S A R F F V D D E V T S
 
AT1G27730.1     P M P A K K P R F D F P V - K L Q L - - - -
gm008898_Glyma0    P H P S K K S R L N L T I P K I E I P Q Y -
gm039438_Glyma1    P H P V M K K P R P F V I P K I E I P Q Y Q
gm047952_Glyma1    P H P V M K K P R L F V I P K I E I P Q F Q
gm014082_Glyma0    P H P S K K S R F N L T I P K I E I P Q Y -
 
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