fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G27740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm012119 not found in 302aa AT1G27740.1 1st_1st 0.273318872 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G27740.1     MDVFVDGELESLL------------GMFNFDQCSSSKE------------------ERPR
Sm012119_Selmo1 ----MDDCCSSLLPPASARAHHHSHSSPDQDQASSNNSLSDISSSFFDQDYDWASLQQPQ
                    :*.  .***            .  : **.**.:.                  ::*:

AT1G27740.1     -------DELLGLSSLYNGHLHQHQHHNNVLSSDHHAFLLPDMFPFG-----AMPGGNL-
Sm012119_Selmo1 RSNADSSTELLNSSTL----ISQSQQTLDQFGGFNLNFLIASSRPYGQQYETAVPCFQMV
                        ***. *:*    : * *:  : :.. :  **:..  *:*     *:*  :: 

AT1G27740.1     -PAMLDSWDQSHHLQETSSLKRKLLDVENL--CKTNS-----------NCDVTRQELAKS
Sm012119_Selmo1 SPAM--------QVKPLKSLKRESLDQSTLVNCEDNSPGSARSGVFNPNCSELEQRQPFT
                 ***        :::  .****: ** ..*  *: **           **.  .*. . :

AT1G27740.1     KKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVT------SVKGKTRATKGTATDP
Sm012119_Selmo1 AASDLISNKRQCLDQRLQGW---SSPTNESKHKLSSVNFAGPALNTNGKPRAKRGSATDP
                  .: :*.: : :*:   .*   .* :*.*..: :**.      ..:**.**.:*:****

AT1G27740.1     QSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMY
Sm012119_Selmo1 QSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQVNMLSSDEYWTY
                **:***:***:*********:*****:**** ******:*********:::****: * *

AT1G27740.1     APLAYNGLD--MGFHHNLLSRLM
Sm012119_Selmo1 APTTYNGPETPLGLKLPLTGS--
                ** :*** :  :*::  * .
BoxShade v3.31 C (beta, 970507) Output
AT1G27740.1     M D V F V D G E L E S L L - - - - - - - - - - - - G M F N F D Q C S S S K E - - - - - - - - - - - - - - - - - - E R P R
Sm012119_Selmo1    - - - - M D D C C S S L L P P A S A R A H H H S H S S P D Q D Q A S S N N S L S D I S S S F F D Q D Y D W A S L Q Q P Q
 
AT1G27740.1     - - - - - - - D E L L G L S S L Y N G H L H Q H Q H H N N V L S S D H H A F L L P D M F P F G - - - - - A M P G G N L -
Sm012119_Selmo1    R S N A D S S T E L L N S S T L - - - - I S Q S Q Q T L D Q F G G F N L N F L I A S S R P Y G Q Q Y E T A V P C F Q M V
 
AT1G27740.1     - P A M L D S W D Q S H H L Q E T S S L K R K L L D V E N L - - C K T N S - - - - - - - - - - - N C D V T R Q E L A K S
Sm012119_Selmo1    S P A M - - - - - - - - Q V K P L K S L K R E S L D Q S T L V N C E D N S P G S A R S G V F N P N C S E L E Q R Q P F T
 
AT1G27740.1     K K K Q R V S S E S N T V D E S N T N W V D G Q S L S N S S D D E K A S V T - - - - - - S V K G K T R A T K G T A T D P
Sm012119_Selmo1    A A S D L I S N K R Q C L D Q R L Q G W - - - S S P T N E S K H K L S S V N F A G P A L N T N G K P R A K R G S A T D P
 
AT1G27740.1     Q S L Y A R K R R E K I N E R L K T L Q N L V P N G T K V D I S T M L E E A V H Y V K F L Q L Q I K L L S S D D L W M Y
Sm012119_Selmo1    Q S V Y A R H R R E R I N E R L K T L Q H L V P N G A K V D I V T M L E E A I H Y V K F L Q L Q V N M L S S D E Y W T Y
 
AT1G27740.1     A P L A Y N G L D - - M G F H H N L L S R L M
Sm012119_Selmo1    A P T T Y N G P E T P L G L K L P L T G S - -
 
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