fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031633 ASIWGFDLEEKKPEPLIE in 117/444 AT1G28050.1 1st_1st 0.43125 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28050.1     -----MSSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNC
pt031633_POPTR_ MVTHKSKTKETVPCDFCSEQTAVLYCRADSAKLCLFCDQHVHSANLLSRKHVRSQICDNC
                      .:.* ******.*:****:****:***** ***:**:*****************

AT1G28050.1     GNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLE
pt031633_POPTR_ STEPVSFRCSTDNLVLCQECDWDAHGSCSVSASHDRTTIEGFSGCPSALDLASIWGFDLE
                ..****.** ****:********.******* :* *:::**********:**::**:***

AT1G28050.1     QGRKDEENQVPMMAMMMDN-----FGMQLDSWV-------LGSNELIVPSDTTFKKRGSC
pt031633_POPTR_ EKKPE-----PLIENWSNNSCGVIHDLVNEPWVYDKSSGNLTFQDLMVPNENNNNGNRNI
                : : :     *::    :*     ..:  :.**       *  ::*:**.:.. : . . 

AT1G28050.1     GS--SCGRYKQVLCKQLEELLKSGVVGGDGDDGDRDRDCDREGACDGDGDGEAGEGLMVP
pt031633_POPTR_ DNSPSCGKYKHVICKQLFELFKRDLIGG-GVEGEGCGFGDGEGCGFGGGDG-GGETLVT-
                ..  ***:**:*:**** **:* .::** * :*:     * **.  *.*** .** *:. 

AT1G28050.1     EMSERLKWSRDVEEINGGGGGGVNQQWNATTTNPSGGQSSQIWDFNLGQSRGPEDTSRVE
pt031633_POPTR_ --QSRSGWRSGVKGVQFGNGND-GERISCVFNNDSGLLLLQVWDFHLGQLRNHDESGQLE
                  ..*  *  .*: :: *.*.. .:: ... .* **    *:***:*** *. :::.::*

AT1G28050.1     AAYVGKGAASSFTINNFVDHMNETCSTNVKGVKEIKKDDYKRSTSGQVQ-PTKSESNNRP
pt031633_POPTR_ IEYVANDAG--FVIKDFGELMKETSSTSPKMLGDMYQMNCSTAHDDMTQGPATSESNNLP
                  **.:.*.  *.*::* : *:**.**. * : :: : : . : .. .* *:.***** *

AT1G28050.1     IT---FGSEKGSNSSSDLHFTEH---IAGTSCKTTRLVATKADLERLAQNRGDAMQRYKE
pt031633_POPTR_ IVRSGFSKPRCSSSSNDVQFMEQSILIRGEGLKME--AATKVDMELLARNRGDAMQRYKE
                *.   *.. : *.**.*::* *:   * * . *    .***.*:* **:***********

AT1G28050.1     KRKTRRYDKTIRYESRKARADTRLRVRGRFVKASEAPYP
pt031633_POPTR_ KKKNRRYDKHIRYESRKARADTRKRVKGRFVKTTEAPDS
                *:*.***** ************* **:*****::*** .
BoxShade v3.31 C (beta, 970507) Output
AT1G28050.1     - - - - - M S S S E R V P C D F C G E R T A V L F C R A D T A K L C L P C D Q Q V H T A N L L S R K H V R S Q I C D N C
pt031633_POPTR_    M V T H K S K T K E T V P C D F C S E Q T A V L Y C R A D S A K L C L F C D Q H V H S A N L L S R K H V R S Q I C D N C
 
AT1G28050.1     G N E P V S V R C F T D N L I L C Q E C D W D V H G S C S V S D A H V R S A V E G F S G C P S A L E L A A L W G L D L E
pt031633_POPTR_    S T E P V S F R C S T D N L V L C Q E C D W D A H G S C S V S A S H D R T T I E G F S G C P S A L D L A S I W G F D L E
 
AT1G28050.1     Q G R K D E E N Q V P M M A M M M D N - - - - - F G M Q L D S W V - - - - - - - L G S N E L I V P S D T T F K K R G S C
pt031633_POPTR_    E K K P E - - - - - P L I E N W S N N S C G V I H D L V N E P W V Y D K S S G N L T F Q D L M V P N E N N N N G N R N I
 
AT1G28050.1     G S - - S C G R Y K Q V L C K Q L E E L L K S G V V G G D G D D G D R D R D C D R E G A C D G D G D G E A G E G L M V P
pt031633_POPTR_    D N S P S C G K Y K H V I C K Q L F E L F K R D L I G G - G V E G E G C G F G D G E G C G F G G G D G - G G E T L V T -
 
AT1G28050.1     E M S E R L K W S R D V E E I N G G G G G G V N Q Q W N A T T T N P S G G Q S S Q I W D F N L G Q S R G P E D T S R V E
pt031633_POPTR_    - - Q S R S G W R S G V K G V Q F G N G N D - G E R I S C V F N N D S G L L L L Q V W D F H L G Q L R N H D E S G Q L E
 
AT1G28050.1     A A Y V G K G A A S S F T I N N F V D H M N E T C S T N V K G V K E I K K D D Y K R S T S G Q V Q - P T K S E S N N R P
pt031633_POPTR_    I E Y V A N D A G - - F V I K D F G E L M K E T S S T S P K M L G D M Y Q M N C S T A H D D M T Q G P A T S E S N N L P
 
AT1G28050.1     I T - - - F G S E K G S N S S S D L H F T E H - - - I A G T S C K T T R L V A T K A D L E R L A Q N R G D A M Q R Y K E
pt031633_POPTR_    I V R S G F S K P R C S S S S N D V Q F M E Q S I L I R G E G L K M E - - A A T K V D M E L L A R N R G D A M Q R Y K E
 
AT1G28050.1     K R K T R R Y D K T I R Y E S R K A R A D T R L R V R G R F V K A S E A P Y P
pt031633_POPTR_    K K K N R R Y D K H I R Y E S R K A R A D T R K R V K G R F V K T T E A P D S
 
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