Input
| Putative repression domain
|
|
AT1G28160.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt011200 |
not found in 295aa |
AT1G28160.1 |
1st_1st |
0.340314136 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G28160.1 MEFNGNLNAGSC-SRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTT
pt011200_POPTR_ MDFTQSTKTNSTPSPSKNKRKQQQQQQKNQNQQEQHEVRFLGVRRRPWGRYAAEIRDPST
*:*. . ::.* * **:.::*:*** : * **. .*::::***************:*:*
AT1G28160.1 KERYWLGTFDTAEEAALAYDRAARSIRGLTARTNFVYSDMPRGSSVTSFVSPDESQRFIS
pt011200_POPTR_ KERHWLGTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPPASSVTSIISPDESQHDIS
***:*********************:** .*********** .*****::******: **
AT1G28160.1 ELFNPPSQLEATNSNNNNNNNLYSSTN----------NQNQNSIEFSYNGWPQEAECGYQ
pt011200_POPTR_ ALFAPPPQNHA-HQNDTNCQKLFFSQDQYPFNAYAYGNSNSNLLT-GGEGWVQ--GCGAG
** **.* .* :.*:.* ::*: * : *.*.* : . :** * **
AT1G28160.1 SIT-----------------------SNAEHCDHELPPLPP---STCFGAELRIPETDSY
pt011200_POPTR_ AADGPGGSYEPNNAGSFGVATEPIYFSNKDNI--ELPPLPPDVNSSCYGSDM----DHGF
: ** :: ******* *:*:*::: ..:
AT1G28160.1 WNVAHASIDTFAFELD---------------GFVDQNSLGQSGTEGFNSLP---------
pt011200_POPTR_ WNDA----GFFGFQEEQKNNGNGLEISGSSLGF-DSNDFGQHGSL-FEIMPSVSDTVTDE
** * . *.*: : ** *.*.:** *: *: :*
AT1G28160.1 ------STFFYQ
pt011200_POPTR_ LDLGSSSTLYF-
**:::
BoxShade v3.31 C (beta, 970507) Output
AT1G28160.1 |
M |
E |
F |
N |
G |
N |
L |
N |
A |
G |
S |
C |
- |
S |
R |
S |
K |
K |
S |
H |
R |
Q |
K |
Q |
Q |
Q |
P |
Q |
P |
Q |
P |
Q |
Q |
H |
I |
E |
E |
I |
K |
Y |
V |
G |
V |
R |
R |
R |
P |
W |
G |
R |
Y |
A |
A |
E |
I |
R |
N |
P |
T |
T |
pt011200_POPTR_ |
M |
D |
F |
T |
Q |
S |
T |
K |
T |
N |
S |
T |
P |
S |
P |
S |
K |
N |
K |
R |
K |
Q |
Q |
Q |
Q |
Q |
Q |
K |
N |
Q |
N |
Q |
Q |
E |
Q |
H |
E |
V |
R |
F |
L |
G |
V |
R |
R |
R |
P |
W |
G |
R |
Y |
A |
A |
E |
I |
R |
D |
P |
S |
T |
|
AT1G28160.1 |
K |
E |
R |
Y |
W |
L |
G |
T |
F |
D |
T |
A |
E |
E |
A |
A |
L |
A |
Y |
D |
R |
A |
A |
R |
S |
I |
R |
G |
L |
T |
A |
R |
T |
N |
F |
V |
Y |
S |
D |
M |
P |
R |
G |
S |
S |
V |
T |
S |
F |
V |
S |
P |
D |
E |
S |
Q |
R |
F |
I |
S |
pt011200_POPTR_ |
K |
E |
R |
H |
W |
L |
G |
T |
F |
D |
T |
A |
E |
E |
A |
A |
L |
A |
Y |
D |
R |
A |
A |
R |
S |
M |
R |
G |
S |
K |
A |
R |
T |
N |
F |
V |
Y |
S |
D |
M |
P |
P |
A |
S |
S |
V |
T |
S |
I |
I |
S |
P |
D |
E |
S |
Q |
H |
D |
I |
S |
|
AT1G28160.1 |
E |
L |
F |
N |
P |
P |
S |
Q |
L |
E |
A |
T |
N |
S |
N |
N |
N |
N |
N |
N |
N |
L |
Y |
S |
S |
T |
N |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
Q |
N |
Q |
N |
S |
I |
E |
F |
S |
Y |
N |
G |
W |
P |
Q |
E |
A |
E |
C |
G |
Y |
Q |
pt011200_POPTR_ |
A |
L |
F |
A |
P |
P |
P |
Q |
N |
H |
A |
- |
H |
Q |
N |
D |
T |
N |
C |
Q |
K |
L |
F |
F |
S |
Q |
D |
Q |
Y |
P |
F |
N |
A |
Y |
A |
Y |
G |
N |
S |
N |
S |
N |
L |
L |
T |
- |
G |
G |
E |
G |
W |
V |
Q |
- |
- |
G |
C |
G |
A |
G |
|
AT1G28160.1 |
S |
I |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
N |
A |
E |
H |
C |
D |
H |
E |
L |
P |
P |
L |
P |
P |
- |
- |
- |
S |
T |
C |
F |
G |
A |
E |
L |
R |
I |
P |
E |
T |
D |
S |
Y |
pt011200_POPTR_ |
A |
A |
D |
G |
P |
G |
G |
S |
Y |
E |
P |
N |
N |
A |
G |
S |
F |
G |
V |
A |
T |
E |
P |
I |
Y |
F |
S |
N |
K |
D |
N |
I |
- |
- |
E |
L |
P |
P |
L |
P |
P |
D |
V |
N |
S |
S |
C |
Y |
G |
S |
D |
M |
- |
- |
- |
- |
D |
H |
G |
F |
|
AT1G28160.1 |
W |
N |
V |
A |
H |
A |
S |
I |
D |
T |
F |
A |
F |
E |
L |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
F |
V |
D |
Q |
N |
S |
L |
G |
Q |
S |
G |
T |
E |
G |
F |
N |
S |
L |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt011200_POPTR_ |
W |
N |
D |
A |
- |
- |
- |
- |
G |
F |
F |
G |
F |
Q |
E |
E |
Q |
K |
N |
N |
G |
N |
G |
L |
E |
I |
S |
G |
S |
S |
L |
G |
F |
- |
D |
S |
N |
D |
F |
G |
Q |
H |
G |
S |
L |
- |
F |
E |
I |
M |
P |
S |
V |
S |
D |
T |
V |
T |
D |
E |
|
AT1G28160.1 |
- |
- |
- |
- |
- |
- |
S |
T |
F |
F |
Y |
Q |
pt011200_POPTR_ |
L |
D |
L |
G |
S |
S |
S |
T |
L |
Y |
F |
- |
|
|