fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025446 not found in 292aa AT1G28300.1 1st_1st 0.246397694 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28300.1     -MDNFLPFPSSN----------------ANSVQELSMDPNNNRSHFTTVPTYDHHQAQPH
pt025446_POPTR_ MLAHYPSTPSSSLTQSNYFAPQYYTTPPCETTQFPSTDSLDQRSQYT--PAAD-------
                 : :: . ***.                .::.*  * *. ::**::*  *: *       

AT1G28300.1     HFLPPFSYPV--------EQMAAVMNPQPVYLSECYPQIPVTQTGSEFGSLVGNPCLWQE
pt025446_POPTR_ ----PF-YPVMVGQNAIEMQRSCILQPNALQLE-------------------------QE
                    ** ***         * :.:::*:.: *.                         **

AT1G28300.1     RGGFLDPRMTKMARINRKNAMMRSRNNSSPNSSPSELVDSKRQLMMLNLK------NNVQ
pt025446_POPTR_ RRA-LDAYKTKVARCMRKLARQRRLGRASSGASSTRITDASR----LALHGAGTDGQNSR
                * . **.  **:**  ** *  *  ..:*..:*.:.:.*:.*    * *:      :* :

AT1G28300.1     ISDKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQ
pt025446_POPTR_ TNTSKDLFEFLTPDNKKLRALLRKDLKNSDVGSLGRIVLPKREVEENLPPLHDKEGILLV
                 . .** ::  * ******.* .*:*****************:.* *** * *****:: 

AT1G28300.1     MRDVFSMQSWSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNLYFAMN
pt025446_POPTR_ LRDIYSNQEWGLKLKFWTNNKSRMYVLENTGEFVKRHGLETGDSLTLYEDESKNL-----
                :**::* *.*.:* ***:*****************::* * ** **:********     

AT1G28300.1     GNSGKQNEGRENE------SRERNHYEEAMLDYIPRDEEEASIAMLIGNLNDHYPIPNDL
pt025446_POPTR_ ---------RSVQDWPVLPSREDN----------P-DEAEAVFL----------------
                         *. :      *** *          * ** ** :                 

AT1G28300.1     MDLTTDLQHHQATSSSMPPEDHAYVGSSDDQVSFNDFEWW
pt025446_POPTR_ --------YHKGAETRISPSSNTTP---------------
                        :*:.:.: :.*..::
BoxShade v3.31 C (beta, 970507) Output
AT1G28300.1     - M D N F L P F P S S N - - - - - - - - - - - - - - - - A N S V Q E L S M D P N N N R S H F T T V P T Y D H H Q A Q P H
pt025446_POPTR_    M L A H Y P S T P S S S L T Q S N Y F A P Q Y Y T T P P C E T T Q F P S T D S L D Q R S Q Y T - - P A A D - - - - - - -
 
AT1G28300.1     H F L P P F S Y P V - - - - - - - - E Q M A A V M N P Q P V Y L S E C Y P Q I P V T Q T G S E F G S L V G N P C L W Q E
pt025446_POPTR_    - - - - P F - Y P V M V G Q N A I E M Q R S C I L Q P N A L Q L E - - - - - - - - - - - - - - - - - - - - - - - - - Q E
 
AT1G28300.1     R G G F L D P R M T K M A R I N R K N A M M R S R N N S S P N S S P S E L V D S K R Q L M M L N L K - - - - - - N N V Q
pt025446_POPTR_    R R A - L D A Y K T K V A R C M R K L A R Q R R L G R A S S G A S S T R I T D A S R - - - - L A L H G A G T D G Q N S R
 
AT1G28300.1     I S D K K D S Y Q Q S T F D N K K L R V L C E K E L K N S D V G S L G R I V L P K R D A E A N L P K L S D K E G I V V Q
pt025446_POPTR_    T N T S K D L F E F L T P D N K K L R A L L R K D L K N S D V G S L G R I V L P K R E V E E N L P P L H D K E G I L L V
 
AT1G28300.1     M R D V F S M Q S W S F K Y K F W S N N K S R M Y V L E N T G E F V K Q N G A E I G D F L T I Y E D E S K N L Y F A M N
pt025446_POPTR_    L R D I Y S N Q E W G L K L K F W T N N K S R M Y V L E N T G E F V K R H G L E T G D S L T L Y E D E S K N L - - - - -
 
AT1G28300.1     G N S G K Q N E G R E N E - - - - - - S R E R N H Y E E A M L D Y I P R D E E E A S I A M L I G N L N D H Y P I P N D L
pt025446_POPTR_    - - - - - - - - - R S V Q D W P V L P S R E D N - - - - - - - - - - P - D E A E A V F L - - - - - - - - - - - - - - - -
 
AT1G28300.1     M D L T T D L Q H H Q A T S S S M P P E D H A Y V G S S D D Q V S F N D F E W W
pt025446_POPTR_    - - - - - - - - Y H K G A E T R I S P S S N T T P - - - - - - - - - - - - - - -
 
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