fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28360.1 PSPLSLDLNHLPSAPSA at 72/189 in AT1G28360.1
RRGLAIDLNEPPPLWL at 178/189 in AT1G28360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036997 RRGIPIDLNEPPPLWL in 153/163 AT1G28360.1 1st_1st 0.482428115 Ia
Pt018447 PPSTSGLSLDLNLPSD in 72/176 AT1G28360.1 1st_1st 0.511182108 Ia
RRGLPIDLNEPPPLWL in 166/176
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G28360.1     MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG
pt018447_POPTR_ MAS---SREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG
gm036997_Glyma1 MASSSASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG
                ***   :** ********************************************** ***

AT1G28360.1     IKAKTNF-PSP-----LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHH
pt018447_POPTR_ AKAKTNF-PSPPSTSGLSLDLN-LPS-----------DPHHHHLRWG-SSPHVGS-----
gm036997_Glyma1 AKAKTNFPPAPP----LCLDLN-VPS-----------SDH----RW----PHVPP-----
                 ****** *:*     *.**** :**           . *     *    * * .     

AT1G28360.1     HQHHRI-----FLRTGVLNDKTSDYSSTEAPLYFTSSPNTATS-------SPGYQ-VVGF
pt018447_POPTR_ ---HRFGGLGEFLQTGVVFK----------EMNFNATEAAAASGPVVKIEGPGVGAVAGA
gm036997_Glyma1 ----RSLVLSEFLHTAVLRDIEP------PQLPF---PPAAA---IVAHRSPHAG---GV
                    *      **:*.*: .           : *     :*:        .*      * 

AT1G28360.1     PMMNSSPSPV---TVRRGLAIDLNEPPPLWL
pt018447_POPTR_ PVPENVAPASFLGMVRRGLPIDLNEPPPLWL
gm036997_Glyma1 QVVESSPTASFLGLVRRGIPIDLNEPPPLWL
                 : :. ...     ****:.***********
BoxShade v3.31 C (beta, 970507) Output
AT1G28360.1     M A S T T C A R E V H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T F D T P E E A A L A Y D G A A R F L R G
pt018447_POPTR_    M A S - - - S R E G H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T F D T P E E A A L A Y D G A A R S L R G
gm036997_Glyma1    M A S S S A S R E G H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T F D T P E E A A L A Y D G A A R S L R G
 
AT1G28360.1     I K A K T N F - P S P - - - - - L S L D L N H L P S A P S A A T A A A N N Q P H Q H Q Q L W F A A P P P V P P S S D H H
pt018447_POPTR_    A K A K T N F - P S P P S T S G L S L D L N - L P S - - - - - - - - - - - D P H H H H L R W G - S S P H V G S - - - - -
gm036997_Glyma1    A K A K T N F P P A P P - - - - L C L D L N - V P S - - - - - - - - - - - S D H - - - - R W - - - - P H V P P - - - - -
 
AT1G28360.1     H Q H H R I - - - - - F L R T G V L N D K T S D Y S S T E A P L Y F T S S P N T A T S - - - - - - - S P G Y Q - V V G F
pt018447_POPTR_    - - - H R F G G L G E F L Q T G V V F K - - - - - - - - - - E M N F N A T E A A A A S G P V V K I E G P G V G A V A G A
gm036997_Glyma1    - - - - R S L V L S E F L H T A V L R D I E P - - - - - - P Q L P F - - - P P A A A - - - I V A H R S P H A G - - - G V
 
AT1G28360.1     P M M N S S P S P V - - - T V R R G L A I D L N E P P P L W L
pt018447_POPTR_    P V P E N V A P A S F L G M V R R G L P I D L N E P P P L W L
gm036997_Glyma1    Q V V E S S P T A S F L G L V R R G I P I D L N E P P P L W L
 
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