fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28360.1 PSPLSLDLNHLPSAPSA at 72/189 in AT1G28360.1
RRGLAIDLNEPPPLWL at 178/189 in AT1G28360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022249 AGELPFDLNEPPPALLFG in 176/189 AT1G28360.1 1st_1st 0.364217252 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28360.1     MASTTCA-----------REVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAAL
Os022249_Os05t0 MELDMGAGGGGGVVGGGRAEAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTYDTPVEAAL
                *     *            *.******************************:*** ****

AT1G28360.1     AYDGAARFLRGIKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAP-----
Os022249_Os05t0 AYDRAAVALRGVKARTNFGS----------GSSGGGGVGGHGHGHSHAQL----PQLHHR
                *** **  ***:**:*** *          .:.... ...:.: *.* **    *     

AT1G28360.1     --PPVPPSSDHHHQHHRIFLRTGVLNDKTSDYSSTEAPLYFTSSP----NTATSSPGYQV
Os022249_Os05t0 MHPPRPPQGPGHF---------GGLD------ISHPSPWHYVYFPARVQAMAPAAAGH--
                  ** **..  *.         * *:       *  :* ::.  *      *.::.*:  

AT1G28360.1     VGFPMMNSSPS-PVTVRRG-----LAIDLNEPPPLWL---
Os022249_Os05t0 VAAHVAASLPSTTLELRTGPSAGELPFDLNEPPPALLFGS
                *.  :  * ** .: :* *     *.:*******  *
BoxShade v3.31 C (beta, 970507) Output
AT1G28360.1     M A S T T C A - - - - - - - - - - - R E V H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T F D T P E E A A L
Os022249_Os05t0    M E L D M G A G G G G G V V G G G R A E A H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T Y D T P V E A A L
 
AT1G28360.1     A Y D G A A R F L R G I K A K T N F P S P L S L D L N H L P S A P S A A T A A A N N Q P H Q H Q Q L W F A A P - - - - -
Os022249_Os05t0    A Y D R A A V A L R G V K A R T N F G S - - - - - - - - - - G S S G G G G V G G H G H G H S H A Q L - - - - P Q L H H R
 
AT1G28360.1     - - P P V P P S S D H H H Q H H R I F L R T G V L N D K T S D Y S S T E A P L Y F T S S P - - - - N T A T S S P G Y Q V
Os022249_Os05t0    M H P P R P P Q G P G H F - - - - - - - - - G G L D - - - - - - I S H P S P W H Y V Y F P A R V Q A M A P A A A G H - -
 
AT1G28360.1     V G F P M M N S S P S - P V T V R R G - - - - - L A I D L N E P P P L W L - - -
Os022249_Os05t0    V A A H V A A S L P S T T L E L R T G P S A G E L P F D L N E P P P A L L F G S
 
0