Input
| Putative repression domain
|
|
AT1G28360.1 |
PSPLSLDLNHLPSAPSA at 72/189 in AT1G28360.1 |
|
RRGLAIDLNEPPPLWL at 178/189 in AT1G28360.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb008876 |
not found in 92aa |
AT1G28360.1 |
1st_1st |
0.361022364 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G28360.1 ------MASTTCAREVH------------------YRGVRKRPWGRYAAEIRDPWKKTRV
Sb008876_Sorbi1 PSSRSKMDPTLRAVLGHGGGDGGARGGGGGGGAERFRGVRKRPWGRYAAEIRDPWKKTRV
* .* * * :************************
AT1G28360.1 WLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQH
Sb008876_Sorbi1 WLGTFDTPAEAALAYDRAARTLRGAKAKTNFP----------------------------
******** ******* *** *** *******
AT1G28360.1 QQLWFAAPPPVPPSSDHHHQHHRIFLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGY
Sb008876_Sorbi1 ------------------------------------------------------------
AT1G28360.1 QVVGFPMMNSSPSPVTVRRGLAIDLNEPPPLWL
Sb008876_Sorbi1 ---------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G28360.1 |
- |
- |
- |
- |
- |
- |
M |
A |
S |
T |
T |
C |
A |
R |
E |
V |
H |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Y |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
Y |
A |
A |
E |
I |
R |
D |
P |
W |
K |
K |
T |
R |
V |
Sb008876_Sorbi1 |
P |
S |
S |
R |
S |
K |
M |
D |
P |
T |
L |
R |
A |
V |
L |
G |
H |
G |
G |
G |
D |
G |
G |
A |
R |
G |
G |
G |
G |
G |
G |
G |
A |
E |
R |
F |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
Y |
A |
A |
E |
I |
R |
D |
P |
W |
K |
K |
T |
R |
V |
|
AT1G28360.1 |
W |
L |
G |
T |
F |
D |
T |
P |
E |
E |
A |
A |
L |
A |
Y |
D |
G |
A |
A |
R |
F |
L |
R |
G |
I |
K |
A |
K |
T |
N |
F |
P |
S |
P |
L |
S |
L |
D |
L |
N |
H |
L |
P |
S |
A |
P |
S |
A |
A |
T |
A |
A |
A |
N |
N |
Q |
P |
H |
Q |
H |
Sb008876_Sorbi1 |
W |
L |
G |
T |
F |
D |
T |
P |
A |
E |
A |
A |
L |
A |
Y |
D |
R |
A |
A |
R |
T |
L |
R |
G |
A |
K |
A |
K |
T |
N |
F |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT1G28360.1 |
Q |
Q |
L |
W |
F |
A |
A |
P |
P |
P |
V |
P |
P |
S |
S |
D |
H |
H |
H |
Q |
H |
H |
R |
I |
F |
L |
R |
T |
G |
V |
L |
N |
D |
K |
T |
S |
D |
Y |
S |
S |
T |
E |
A |
P |
L |
Y |
F |
T |
S |
S |
P |
N |
T |
A |
T |
S |
S |
P |
G |
Y |
Sb008876_Sorbi1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT1G28360.1 |
Q |
V |
V |
G |
F |
P |
M |
M |
N |
S |
S |
P |
S |
P |
V |
T |
V |
R |
R |
G |
L |
A |
I |
D |
L |
N |
E |
P |
P |
P |
L |
W |
L |
Sb008876_Sorbi1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
|