fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28360.1 PSPLSLDLNHLPSAPSA at 72/189 in AT1G28360.1
RRGLAIDLNEPPPLWL at 178/189 in AT1G28360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036997 RRGIPIDLNEPPPLWL in 153/163 AT1G28360.1 1st_1st 0.482428115 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28360.1     MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG
gm036997_Glyma1 MASSSASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG
                ***::.:** ********************************************** ***

AT1G28360.1     IKAKTNFP--SPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQHH
gm036997_Glyma1 AKAKTNFPPAPPLCLDLN-VPSS-------------DHR--W----PHVPPRSLVLSE--
                 *******  .**.**** :**:             :*:  *    * *** *    :  

AT1G28360.1     RIFLRTGVLNDKTSDYSSTEAP-LYF-TSSPNTATSSP---GYQVVGFPMMNSSPSPV--
gm036997_Glyma1 --FLHTAVLRD-------IEPPQLPFPPAAAIVAHRSPHAGGVQVV-----ESSPTASFL
                  **:*.**.*        *.* * * .::. .*  **   * ***     :***:.   

AT1G28360.1     -TVRRGLAIDLNEPPPLWL
gm036997_Glyma1 GLVRRGIPIDLNEPPPLWL
                  ****:.***********
BoxShade v3.31 C (beta, 970507) Output
AT1G28360.1     M A S T T C A R E V H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T F D T P E E A A L A Y D G A A R F L R G
gm036997_Glyma1    M A S S S A S R E G H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T F D T P E E A A L A Y D G A A R S L R G
 
AT1G28360.1     I K A K T N F P - - S P L S L D L N H L P S A P S A A T A A A N N Q P H Q H Q Q L W F A A P P P V P P S S D H H H Q H H
gm036997_Glyma1    A K A K T N F P P A P P L C L D L N - V P S S - - - - - - - - - - - - - D H R - - W - - - - P H V P P R S L V L S E - -
 
AT1G28360.1     R I F L R T G V L N D K T S D Y S S T E A P - L Y F - T S S P N T A T S S P - - - G Y Q V V G F P M M N S S P S P V - -
gm036997_Glyma1    - - F L H T A V L R D - - - - - - - I E P P Q L P F P P A A A I V A H R S P H A G G V Q V V - - - - - E S S P T A S F L
 
AT1G28360.1     - T V R R G L A I D L N E P P P L W L
gm036997_Glyma1    G L V R R G I P I D L N E P P P L W L
 
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