fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28370.1 GRRVVLDLDLNFPPPPEN at 153/166 in AT1G28370.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018844 VPASPSLDLSLGMSAM in 139/222 AT3G20310.1 not_not 0.410447761 III
PAVGVGLDLNLPPPIE in 210/222
Os004257 MPLPPTLDLDLFHRAA in 128/235 AT3G15210.1 not_not 0.410447761 III
NKAAAFDLDLNRPPPVEN in 223/235
Gm041517 ADSSPLDLNLAPVAVSS in 112/219 AT5G44210.1 not_not 0.436567164 III
NGSRMFDLDLNHPPPHEI in 206/219
Gm037405 NRRILLDLDLNVPPLPEV in 180/193 AT5G44210.1 not_not 0.432835820 III
Gm034499 NRRVLLDLDLNVPPLPEV in 180/193 AT3G15210.1 not_not 0.417910447 III
Gm036996 ADSSPLDLNLAPAAVAS in 115/222 AT5G44210.1 not_not 0.414179104 III
NGSRIFDLDLNHPPPHEI in 209/222
Gm041516 RRGIPIDLNEPPPMWL in 162/172 AT1G28360.1 not_not 0.402985074 III
Pt004210 PRRSVLDLDLNLPPPLDA in 201/213 AT5G44210.1 not_not 0.421641791 III
Pt032466 HHDNKGLSLDLDLNLP in 208/224 AT3G15210.1 not_not 0.417910447 III
Pt025171 SSDTPLDLNLGPAVSTV in 141/243 AT5G44210.1 not_not 0.410447761 III
PRSSVDLDLNLNLPPP in 229/243
Pt024322 RRDSKGLSLDLDLNLA in 210/226 AT3G15210.1 not_not 0.410447761 III
Pt036816 RSSILHLDLNLPPPAD in 199/210 AT3G15210.1 not_not 0.406716417 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G28370.1     MAPTV----KTAAVKTN------EGNG----VRYRGVRKRPWGRYAAEIRDPFKKSRVWL
pt024322_POPTR_ MAPRE---RSNNNNSPN--------SP-RSEIRFRGVRKRPWGRYAAEIRDPGKKTRVWL
gm037405_Glyma1 MAPRDS--RATALIGPGP-----SLSPAHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWL
gm036996_Glyma1 MAPRD---HKTSNAKAN-----GNGNSGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWL
gm034499_Glyma1 MAPRDS--RATAFAGPGP-----GPSPAHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWL
pt025171_POPTR_ MAPRE----KTAPGKVNG-GTCGGAGGGGKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWL
Os018844_Os04t0 MAPRNA--AEAVAVAVA------EGGGAGMEPRFRGVRKRPWGRYAAEIRDPARKARVWL
gm041516_Glyma1 MAPS-------------------SSASASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWL
Os004257_Os01t0 MAPRAATVEKVAVAPPTGLGLGVGGGVGAGGPHYRGVRKRPWGRYAAEIRDPAKKSRVWL
pt036816_POPTR_ MAPKKLNGNDNGSLKKA------SGDHDKKEIHYRGVRKRPWGRYAAEIRDPGKKSRVWL
gm041517_Glyma1 MAPRD----KTSAVKP-------SGNAGVKDLHFRGVRKRPWGRFAAEIRDPAKKTRVWL
pt032466_POPTR_ MAPIE---KPSSSN-PN--------SPTRSEIRFRGVRKRPWGRYAAEIRDPGKKTRVWL
pt004210_POPTR_ MAPKKLNASNSGCFKKA------SGDHDKKEIHYRGVRKRPWGRYAAEIRDPGKKSRVWL
                ***                             ::**********:******* :*:****

AT1G28370.1     GTFDTPEEAARAYDKRAIEFRGAKAKTNFPC---YNINAHCLSL----------------
pt024322_POPTR_ GTFDTAEEAARAYDAAAREFRGAKAKTNFPTIG-ELNPN---------------------
gm037405_Glyma1 GTFDTAEEAARAYDTAAREFRGAKAKTNFPTPS-ELILNNN-------------------
gm036996_Glyma1 GTFDTAEEAARAYDAAAREFRGPKAKTNFPLPL-ENVK----------------------
gm034499_Glyma1 GTFDTAEEAARAYDTAAREFRGAKAKTNFPTPS-ELILNN--------------------
pt025171_POPTR_ GTFDTAEEAARAYDAAAREFRGSKAKTNYAYPSYENVRKNTISVDSNHKASNKNNSCGGG
Os018844_Os04t0 GTFDTAEAAARAYDSAALHFRGPKAKTNFPVAF-AHAHHHAPPPPLPKAAAL--------
gm041516_Glyma1 GTFDTPEEAALAYDGAARSLRGAKAKTNFPPAP---------------------PLCL--
Os004257_Os01t0 GTYDTAEEAARAYDAAAREFRGAKAKTNFPFAS-QSMVG---------------------
pt036816_POPTR_ GTFDTAVEAARAYDKAAREYRGAKAKTNFPIAE-KVVDYDD-------------------
gm041517_Glyma1 GTFDTAEEAARAYDAAAREFRGPKAKTNFPLPS-ENFK----------------------
pt032466_POPTR_ GTFDTAEEAARAYDAAAREFRGAKAKTNFPTVG-ELIPI---------------------
pt004210_POPTR_ GTFDTAEEAAKAYDKAAREYRGAKAKTNFPFSG-EVVNYDD-------------------
                **:**.  ** ***  *   **.*****:.                              

AT1G28370.1     --------TQSLSQSSTVESSFPN-----------------------LNLG---------
pt024322_POPTR_ -------PTRSPSQSSTVESSSPPPPRAASP-----------PPPLDLTLNISRHKPDRQ
gm037405_Glyma1 -----NINARSPSQTSTLDSSSPP------P-----------PPPLDLTLT---------
gm036996_Glyma1 --------NSSPSQSSTVESSSRDRD-VAAD-----------SSPLDLNLA---------
gm034499_Glyma1 -------NIRSPSQSSTLDSSSPP-----SP-----------PPPLDLTLT---------
pt025171_POPTR_ GGGNSN-NNQSPSQSSTVEFSSSD-------------------TPLDLNLG---------
Os018844_Os04t0 -------AVVSPT-SSTVESSSRDTP-AAAPVAAAAKAQVPASPSLDLSLG---------
gm041516_Glyma1 --------------DLNVPSSDHRWP--------------HHVPPRSLVLS--------D
Os004257_Os01t0 -------CGGSPSSNSTVDTGGGG---VQTPM-RA----MPLPPTLDLDLF---HR----
pt036816_POPTR_ -------EKQSSSQSSTVESSSSP---VVSAVAR------------DVTRQ---------
gm041517_Glyma1 --------NASPSQSSTVESSSRDRD-VAAD-----------SSPLDLNLA---------
pt032466_POPTR_ -------PTRSPSQSSTVESSSPTHPRAASP-----------PPPLDLTLNSAHHNTARH
pt004210_POPTR_ -------DKQSSSHSSTVESSSSP---VVSAA---------------VTRQVG-------
                                .:  .                          :            

AT1G28370.1     --SDSVSS------RFPF-----PK----IQVKAGMMVFDE-------------------
pt024322_POPTR_ PFPNGVSFPG--GAWFPF-----PA------VARPVFFFDAFAHAKNDIPNNNSIVNNIN
gm037405_Glyma1 --PLSSA-------VFP--------------VARPVLFFDAFARA-----DTMVAVSRRE
gm036996_Glyma1 --PAAVAS-----ARFPFQH-QFPVFTGAVPAANQVLYFDAVLRA--------------G
gm034499_Glyma1 --PLSVAV-----TVFP--------------VARPVLFFDAFARA-----DAMIAVSRRE
pt025171_POPTR_ --P-AVST-----VRLPFQ----PM----VMNHQQVIYFDAVMKS---------------
Os018844_Os04t0 -MSAMVAAQ-------PFLF-LDPRVAVTVAVAAPVPRRPAVVSVKKEV-----------
gm041516_Glyma1 FLHTAVLRDID-PPQQPFP----PA--AAVAHRNP-------------------------
Os004257_Os01t0 --AAAVTAVAGTGVRFPFR--GYPV---ARPATHPYFFYEQAAAA---------------
pt036816_POPTR_ -----VGGVVG-TGRFPFVFQQQPP---HVNAVGPVWFLDSTVKPEFVA-----------
gm041517_Glyma1 --PVAVSS-----ARFPFRN-QFPVFPGAVPAANQVMYFDAVLRA--------------G
pt032466_POPTR_ QFPDGVSFHG--GAWFPL-----PA------AQRPVFFFDAFAQAKNN--DKISIANNIN
pt004210_POPTR_ --GGGVGGVVG-MGGFPFVYQQQQQ---NVNVVAPVWFFDS-VRPEFVT-----------
                                *                                           

AT1G28370.1     -----------------------------R--SESDSSSVVMDV------VRYEGRRVVL
pt024322_POPTR_ MCR---FD----------RTVMVN-GGGAQ--SDSDSSSVV-DYDHRR-----DSKGLSL
gm037405_Glyma1 TCG---FE----------RPA----ADFRR--GDSDS-----DYNRR----------ILL
gm036996_Glyma1 MAGPRGFAFGYNHH-----PVAASEFHATT--SDSDSSSVI-DLNHNEGEVKGNGSRI-F
gm034499_Glyma1 MCG---FE----------RPA----ADFRR--NDSDS-----DYNRR----------VLL
pt025171_POPTR_ QCQKTVFDNGYHHHHHPNQPMGFS-CGGIQ--SDSDSSSIVFDLNHQD--IKTPRSSVDL
Os018844_Os04t0 ----ARLD--------------------EQ--SDTGSSSSVVDASPA----------VGV
gm041516_Glyma1 -------------HGGA-MPV----GGGVQVMEGSPTASFL-GFVRRG-----------I
Os004257_Os01t0 ----AAAEAGYRMMKLA-PPVTV--AAVAQ--SDSDSSSVV-DLAPSP-PAVTANKAAAF
pt036816_POPTR_ ----QRFPVRY-------DPVGLE--GGAH--SDSDSSSVI-DFKPRS---------SIL
gm041517_Glyma1 MAGPRGFAFGYNPH-----PVAASEYHATT--SDSDSSSVI-DLNHNEGVVKGNGSRM-F
pt032466_POPTR_ MCR---FD----------RTAMVN-GGGVQ--SDSDSSSVL-DYDHHH-----DNKGLSL
pt004210_POPTR_ ----QRFPVRF-------DQVGLESAGGAQ--SDSDSSSMV-DCQPRR---------SVL
                                                  : :     .                .

AT1G28370.1     DLDLNFPPPPEN-
pt024322_POPTR_ DLDLNLAPPPEVS
gm037405_Glyma1 DLDLNVPPLPEVA
gm036996_Glyma1 DLDLNHPPPHEIA
gm034499_Glyma1 DLDLNVPPLPEVA
pt025171_POPTR_ DLNLNLPPPPEIA
Os018844_Os04t0 GLDLNLPPPIEEA
gm041516_Glyma1 PIDLNEPPPMWL-
Os004257_Os01t0 DLDLNRPPPVEN-
pt036816_POPTR_ HLDLNLPPPADA-
gm041517_Glyma1 DLDLNHPPPHEIA
pt032466_POPTR_ DLDLNLPPPPEVA
pt004210_POPTR_ DLDLNLPPPLDA-
                 ::** .*
BoxShade v3.31 C (beta, 970507) Output
AT1G28370.1     M A P T V - - - - K T A A V K T N - - - - - - E G N G - - - - V R Y R G V R K R P W G R Y A A E I R D P F K K S R V W L
pt024322_POPTR_    M A P R E - - - R S N N N N S P N - - - - - - - - S P - R S E I R F R G V R K R P W G R Y A A E I R D P G K K T R V W L
gm037405_Glyma1    M A P R D S - - R A T A L I G P G P - - - - - S L S P A H K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W L
gm036996_Glyma1    M A P R D - - - H K T S N A K A N - - - - - G N G N S G V K E V H F R G V R K R P W G R Y A A E I R D P G K K S R V W L
gm034499_Glyma1    M A P R D S - - R A T A F A G P G P - - - - - G P S P A H K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W L
pt025171_POPTR_    M A P R E - - - - K T A P G K V N G - G T C G G A G G G G K E V H F R G V R K R P W G R Y A A E I R D P G K K S R V W L
Os018844_Os04t0    M A P R N A - - A E A V A V A V A - - - - - - E G G G A G M E P R F R G V R K R P W G R Y A A E I R D P A R K A R V W L
gm041516_Glyma1    M A P S - - - - - - - - - - - - - - - - - - - S S A S A S R E G H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L
Os004257_Os01t0    M A P R A A T V E K V A V A P P T G L G L G V G G G V G A G G P H Y R G V R K R P W G R Y A A E I R D P A K K S R V W L
pt036816_POPTR_    M A P K K L N G N D N G S L K K A - - - - - - S G D H D K K E I H Y R G V R K R P W G R Y A A E I R D P G K K S R V W L
gm041517_Glyma1    M A P R D - - - - K T S A V K P - - - - - - - S G N A G V K D L H F R G V R K R P W G R F A A E I R D P A K K T R V W L
pt032466_POPTR_    M A P I E - - - K P S S S N - P N - - - - - - - - S P T R S E I R F R G V R K R P W G R Y A A E I R D P G K K T R V W L
pt004210_POPTR_    M A P K K L N A S N S G C F K K A - - - - - - S G D H D K K E I H Y R G V R K R P W G R Y A A E I R D P G K K S R V W L
 
AT1G28370.1     G T F D T P E E A A R A Y D K R A I E F R G A K A K T N F P C - - - Y N I N A H C L S L - - - - - - - - - - - - - - - -
pt024322_POPTR_    G T F D T A E E A A R A Y D A A A R E F R G A K A K T N F P T I G - E L N P N - - - - - - - - - - - - - - - - - - - - -
gm037405_Glyma1    G T F D T A E E A A R A Y D T A A R E F R G A K A K T N F P T P S - E L I L N N N - - - - - - - - - - - - - - - - - - -
gm036996_Glyma1    G T F D T A E E A A R A Y D A A A R E F R G P K A K T N F P L P L - E N V K - - - - - - - - - - - - - - - - - - - - - -
gm034499_Glyma1    G T F D T A E E A A R A Y D T A A R E F R G A K A K T N F P T P S - E L I L N N - - - - - - - - - - - - - - - - - - - -
pt025171_POPTR_    G T F D T A E E A A R A Y D A A A R E F R G S K A K T N Y A Y P S Y E N V R K N T I S V D S N H K A S N K N N S C G G G
Os018844_Os04t0    G T F D T A E A A A R A Y D S A A L H F R G P K A K T N F P V A F - A H A H H H A P P P P L P K A A A L - - - - - - - -
gm041516_Glyma1    G T F D T P E E A A L A Y D G A A R S L R G A K A K T N F P P A P - - - - - - - - - - - - - - - - - - - - - P L C L - -
Os004257_Os01t0    G T Y D T A E E A A R A Y D A A A R E F R G A K A K T N F P F A S - Q S M V G - - - - - - - - - - - - - - - - - - - - -
pt036816_POPTR_    G T F D T A V E A A R A Y D K A A R E Y R G A K A K T N F P I A E - K V V D Y D D - - - - - - - - - - - - - - - - - - -
gm041517_Glyma1    G T F D T A E E A A R A Y D A A A R E F R G P K A K T N F P L P S - E N F K - - - - - - - - - - - - - - - - - - - - - -
pt032466_POPTR_    G T F D T A E E A A R A Y D A A A R E F R G A K A K T N F P T V G - E L I P I - - - - - - - - - - - - - - - - - - - - -
pt004210_POPTR_    G T F D T A E E A A K A Y D K A A R E Y R G A K A K T N F P F S G - E V V N Y D D - - - - - - - - - - - - - - - - - - -
 
AT1G28370.1     - - - - - - - - T Q S L S Q S S T V E S S F P N - - - - - - - - - - - - - - - - - - - - - - - L N L G - - - - - - - - -
pt024322_POPTR_    - - - - - - - P T R S P S Q S S T V E S S S P P P P R A A S P - - - - - - - - - - - P P P L D L T L N I S R H K P D R Q
gm037405_Glyma1    - - - - - N I N A R S P S Q T S T L D S S S P P - - - - - - P - - - - - - - - - - - P P P L D L T L T - - - - - - - - -
gm036996_Glyma1    - - - - - - - - N S S P S Q S S T V E S S S R D R D - V A A D - - - - - - - - - - - S S P L D L N L A - - - - - - - - -
gm034499_Glyma1    - - - - - - - N I R S P S Q S S T L D S S S P P - - - - - S P - - - - - - - - - - - P P P L D L T L T - - - - - - - - -
pt025171_POPTR_    G G G N S N - N N Q S P S Q S S T V E F S S S D - - - - - - - - - - - - - - - - - - - T P L D L N L G - - - - - - - - -
Os018844_Os04t0    - - - - - - - A V V S P T - S S T V E S S S R D T P - A A A P V A A A A K A Q V P A S P S L D L S L G - - - - - - - - -
gm041516_Glyma1    - - - - - - - - - - - - - - D L N V P S S D H R W P - - - - - - - - - - - - - - H H V P P R S L V L S - - - - - - - - D
Os004257_Os01t0    - - - - - - - C G G S P S S N S T V D T G G G G - - - V Q T P M - R A - - - - M P L P P T L D L D L F - - - H R - - - -
pt036816_POPTR_    - - - - - - - E K Q S S S Q S S T V E S S S S P - - - V V S A V A R - - - - - - - - - - - - D V T R Q - - - - - - - - -
gm041517_Glyma1    - - - - - - - - N A S P S Q S S T V E S S S R D R D - V A A D - - - - - - - - - - - S S P L D L N L A - - - - - - - - -
pt032466_POPTR_    - - - - - - - P T R S P S Q S S T V E S S S P T H P R A A S P - - - - - - - - - - - P P P L D L T L N S A H H N T A R H
pt004210_POPTR_    - - - - - - - D K Q S S S H S S T V E S S S S P - - - V V S A A - - - - - - - - - - - - - - - V T R Q V G - - - - - - -
 
AT1G28370.1     - - S D S V S S - - - - - - R F P F - - - - - P K - - - - I Q V K A G M M V F D E - - - - - - - - - - - - - - - - - - -
pt024322_POPTR_    P F P N G V S F P G - - G A W F P F - - - - - P A - - - - - - V A R P V F F F D A F A H A K N D I P N N N S I V N N I N
gm037405_Glyma1    - - P L S S A - - - - - - - V F P - - - - - - - - - - - - - - V A R P V L F F D A F A R A - - - - - D T M V A V S R R E
gm036996_Glyma1    - - P A A V A S - - - - - A R F P F Q H - Q F P V F T G A V P A A N Q V L Y F D A V L R A - - - - - - - - - - - - - - G
gm034499_Glyma1    - - P L S V A V - - - - - T V F P - - - - - - - - - - - - - - V A R P V L F F D A F A R A - - - - - D A M I A V S R R E
pt025171_POPTR_    - - P - A V S T - - - - - V R L P F Q - - - - P M - - - - V M N H Q Q V I Y F D A V M K S - - - - - - - - - - - - - - -
Os018844_Os04t0    - M S A M V A A Q - - - - - - - P F L F - L D P R V A V T V A V A A P V P R R P A V V S V K K E V - - - - - - - - - - -
gm041516_Glyma1    F L H T A V L R D I D - P P Q Q P F P - - - - P A - - A A V A H R N P - - - - - - - - - - - - - - - - - - - - - - - - -
Os004257_Os01t0    - - A A A V T A V A G T G V R F P F R - - G Y P V - - - A R P A T H P Y F F Y E Q A A A A - - - - - - - - - - - - - - -
pt036816_POPTR_    - - - - - V G G V V G - T G R F P F V F Q Q Q P P - - - H V N A V G P V W F L D S T V K P E F V A - - - - - - - - - - -
gm041517_Glyma1    - - P V A V S S - - - - - A R F P F R N - Q F P V F P G A V P A A N Q V M Y F D A V L R A - - - - - - - - - - - - - - G
pt032466_POPTR_    Q F P D G V S F H G - - G A W F P L - - - - - P A - - - - - - A Q R P V F F F D A F A Q A K N N - - D K I S I A N N I N
pt004210_POPTR_    - - G G G V G G V V G - M G G F P F V Y Q Q Q Q Q - - - N V N V V A P V W F F D S - V R P E F V T - - - - - - - - - - -
 
AT1G28370.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R - - S E S D S S S V V M D V - - - - - - V R Y E G R R V V L
pt024322_POPTR_    M C R - - - F D - - - - - - - - - - R T V M V N - G G G A Q - - S D S D S S S V V - D Y D H R R - - - - - D S K G L S L
gm037405_Glyma1    T C G - - - F E - - - - - - - - - - R P A - - - - A D F R R - - G D S D S - - - - - D Y N R R - - - - - - - - - - I L L
gm036996_Glyma1    M A G P R G F A F G Y N H H - - - - - P V A A S E F H A T T - - S D S D S S S V I - D L N H N E G E V K G N G S R I - F
gm034499_Glyma1    M C G - - - F E - - - - - - - - - - R P A - - - - A D F R R - - N D S D S - - - - - D Y N R R - - - - - - - - - - V L L
pt025171_POPTR_    Q C Q K T V F D N G Y H H H H H P N Q P M G F S - C G G I Q - - S D S D S S S I V F D L N H Q D - - I K T P R S S V D L
Os018844_Os04t0    - - - - A R L D - - - - - - - - - - - - - - - - - - - - E Q - - S D T G S S S S V V D A S P A - - - - - - - - - - V G V
gm041516_Glyma1    - - - - - - - - - - - - - H G G A - M P V - - - - G G G V Q V M E G S P T A S F L - G F V R R G - - - - - - - - - - - I
Os004257_Os01t0    - - - - A A A E A G Y R M M K L A - P P V T V - - A A V A Q - - S D S D S S S V V - D L A P S P - P A V T A N K A A A F
pt036816_POPTR_    - - - - Q R F P V R Y - - - - - - - D P V G L E - - G G A H - - S D S D S S S V I - D F K P R S - - - - - - - - - S I L
gm041517_Glyma1    M A G P R G F A F G Y N P H - - - - - P V A A S E Y H A T T - - S D S D S S S V I - D L N H N E G V V K G N G S R M - F
pt032466_POPTR_    M C R - - - F D - - - - - - - - - - R T A M V N - G G G V Q - - S D S D S S S V L - D Y D H H H - - - - - D N K G L S L
pt004210_POPTR_    - - - - Q R F P V R F - - - - - - - D Q V G L E S A G G A Q - - S D S D S S S M V - D C Q P R R - - - - - - - - - S V L
 
AT1G28370.1     D L D L N F P P P P E N -
pt024322_POPTR_    D L D L N L A P P P E V S
gm037405_Glyma1    D L D L N V P P L P E V A
gm036996_Glyma1    D L D L N H P P P H E I A
gm034499_Glyma1    D L D L N V P P L P E V A
pt025171_POPTR_    D L N L N L P P P P E I A
Os018844_Os04t0    G L D L N L P P P I E E A
gm041516_Glyma1    P I D L N E P P P M W L -
Os004257_Os01t0    D L D L N R P P P V E N -
pt036816_POPTR_    H L D L N L P P P A D A -
gm041517_Glyma1    D L D L N H P P P H E I A
pt032466_POPTR_    D L D L N L P P P P E V A
pt004210_POPTR_    D L D L N L P P P L D A -
 
0