fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28370.1 GRRVVLDLDLNFPPPPEN at 153/166 in AT1G28370.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028444 DSWRTSLDLNLSAMVP in 143/323 AT1G28360.1 1st_not 0.402985074 II
NFPFLLDLNSPPCLDEE in 304/323
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28370.1     MAPTVKTAAVKTNEG-NGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAY
pp028444_Pp1s12 MAARDEKASTKSSQAYQGVHFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDTAEEAARAY
                **.  :.*:.*:.:. :**::**********:*******:**:*********.*******

AT1G28370.1     DKRAIEFRGAKAKTNFPC------------------------------------------
pp028444_Pp1s12 DSAARALRGSKAKTNFACPPSSDDQSTSHSSTVESWSTLPSCQNVCQPHHQHHQLLKNHP
                *. *  :**:******.*                                          

AT1G28370.1     YNINAHCL-------------------------------------SLTQS----------
pp028444_Pp1s12 NSLNCHQLYGPSVASEADSWRTSLDLNLSAMVPHDPDHQVEEMAQVLNESISAGRSYVLP
                 .:*.* *                                      *.:*          

AT1G28370.1     -----LSQSSTVESSFPNLNL-----GSDSVSSRFP----FPKIQVKA------------
pp028444_Pp1s12 GNAGELSQSSKRHSSTPIQTLFQDTMGKTSYSAKKPSILAVPPVRTSAIPWSLGARWDQN
                     *****. .** *  .*     *. * *:: *    .* ::..*            

AT1G28370.1     --------------GMMVFDE----RSESDSSSVVMDVVRYEGRRVVLD-----------
pp028444_Pp1s12 VALPTGIQPTLLTPGSAVSPETRACSSDCDSSSSV--IVNSESPEIVATPQQRTKPVLRR
                              *  *  *     *:.**** *  :*. *. .:*             

AT1G28370.1     -----LDLNFPPPPEN---------
pp028444_Pp1s12 NFPFLLDLNSPPCLDEEPAVTAVGN
                     **** **  ::
BoxShade v3.31 C (beta, 970507) Output
AT1G28370.1     M A P T V K T A A V K T N E G - N G V R Y R G V R K R P W G R Y A A E I R D P F K K S R V W L G T F D T P E E A A R A Y
pp028444_Pp1s12    M A A R D E K A S T K S S Q A Y Q G V H F R G V R K R P W G R F A A E I R D P W K K T R V W L G T F D T A E E A A R A Y
 
AT1G28370.1     D K R A I E F R G A K A K T N F P C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp028444_Pp1s12    D S A A R A L R G S K A K T N F A C P P S S D D Q S T S H S S T V E S W S T L P S C Q N V C Q P H H Q H H Q L L K N H P
 
AT1G28370.1     Y N I N A H C L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S L T Q S - - - - - - - - - -
pp028444_Pp1s12    N S L N C H Q L Y G P S V A S E A D S W R T S L D L N L S A M V P H D P D H Q V E E M A Q V L N E S I S A G R S Y V L P
 
AT1G28370.1     - - - - - L S Q S S T V E S S F P N L N L - - - - - G S D S V S S R F P - - - - F P K I Q V K A - - - - - - - - - - - -
pp028444_Pp1s12    G N A G E L S Q S S K R H S S T P I Q T L F Q D T M G K T S Y S A K K P S I L A V P P V R T S A I P W S L G A R W D Q N
 
AT1G28370.1     - - - - - - - - - - - - - - G M M V F D E - - - - R S E S D S S S V V M D V V R Y E G R R V V L D - - - - - - - - - - -
pp028444_Pp1s12    V A L P T G I Q P T L L T P G S A V S P E T R A C S S D C D S S S S V - - I V N S E S P E I V A T P Q Q R T K P V L R R
 
AT1G28370.1     - - - - - L D L N F P P P P E N - - - - - - - - -
pp028444_Pp1s12    N F P F L L D L N S P P C L D E E P A V T A V G N
 
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