fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28370.1 GRRVVLDLDLNFPPPPEN at 153/166 in AT1G28370.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019626 SSDAPLDLNLGPAVSTV in 136/233 AT1G28370.1 1st_1st 0.440298507 Ia
PRRSVDLDLNLPPPPE in 221/233
Pt004210 PRRSVLDLDLNLPPPLDA in 201/213 AT5G44210.1 not_not 0.421641791 III
Pt032466 HHDNKGLSLDLDLNLP in 208/224 AT3G15210.1 not_not 0.417910447 III
Pt025171 SSDTPLDLNLGPAVSTV in 141/243 AT5G44210.1 not_not 0.410447761 III
PRSSVDLDLNLNLPPP in 229/243
Pt024322 RRDSKGLSLDLDLNLA in 210/226 AT3G15210.1 not_not 0.410447761 III
Pt036816 RSSILHLDLNLPPPAD in 199/210 AT3G15210.1 not_not 0.406716417 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G28370.1     MAPTVKTAAVK-TN---------------EGNGVRYRGVRKRPWGRYAAEIRDPFKKSRV
pt024322_POPTR_ MAPRERSNNNNSPNSP--------------RSEIRFRGVRKRPWGRYAAEIRDPGKKTRV
pt004210_POPTR_ MAPKKLNASNS--------GCFKKASGDHDKKEIHYRGVRKRPWGRYAAEIRDPGKKSRV
pt032466_POPTR_ MAPIEKPSSSN-PNSP-------------TRSEIRFRGVRKRPWGRYAAEIRDPGKKTRV
pt025171_POPTR_ MAPREKTAPGK-VNGGTCGG------AGGGGKEVHFRGVRKRPWGRYAAEIRDPGKKSRV
pt036816_POPTR_ MAPKKLNGNDN--------GSLKKASGDHDKKEIHYRGVRKRPWGRYAAEIRDPGKKSRV
pt019626_POPTR_ MAPREKTAAVK-ASGGGIVG------GGGGGKEVHFRGVRKRPWGRYAAEIRDPSKKSRV
                ***       .                    . :::****************** **:**

AT1G28370.1     WLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP---CYNINAHCLSL--------------
pt024322_POPTR_ WLGTFDTAEEAARAYDAAAREFRGAKAKTNFP------------TI--------------
pt004210_POPTR_ WLGTFDTAEEAAKAYDKAAREYRGAKAKTNFP------FSGEVVNYDD------------
pt032466_POPTR_ WLGTFDTAEEAARAYDAAAREFRGAKAKTNFP------------TV--------------
pt025171_POPTR_ WLGTFDTAEEAARAYDAAAREFRGSKAKTNYAYPSYENVRKNTISVDSNHKASNKNNSCG
pt036816_POPTR_ WLGTFDTAVEAARAYDKAAREYRGAKAKTNFP------IAEKVVDYDD------------
pt019626_POPTR_ WLGTFDTAEEAARAYDTAAREFRGSKAKTNFPYPSCENVKKNVLSIDSNKKAASKNNSGG
                *******. ***:***  * *:**:*****:.                            

AT1G28370.1     ---------TQSLSQSSTVE---SSFP------------NLN-------LGSDS-VSSRF
pt024322_POPTR_ --GELNPNPTRSPSQSSTVE---SSSPPPPRAASPPPPLDLT-------LNISRHKPDRQ
pt004210_POPTR_ --------DKQSSSHSSTVE--SSSSPVVSAA--------VTRQVGGGGVGGVV-GMGGF
pt032466_POPTR_ --GELIPIPTRSPSQSSTVE---SSSPTHPRAASPPPPLDLT-------LNSAHHNTARH
pt025171_POPTR_ GGGGGNSNNNQSPSQSSTVEFSSSDTP-----------LDLN-------LGPAV-STVRL
pt036816_POPTR_ --------EKQSSSQSSTVE--SSSSPVVSAVA-----RDVTRQ-----VGGVV-GTGRF
pt019626_POPTR_ GGG-----NNQSPSQSSTVEFCSSDAP-----------LDLN-------LGPAV-STVRL
                         .:* *:*****   *. *             :.       :.         

AT1G28370.1     PFP-----------KI-----QV---------KAG------------MMVFDE-------
pt024322_POPTR_ PFPNGVSFPGGAWFPFPAVARPVFFFDAFAHAKNDIPNNNSIVNNINMCRFDR-------
pt004210_POPTR_ PFV----YQQQQ--QNVNVVAPVWFFDS-VRPEFV-TQRF-------PVRFDQ-------
pt032466_POPTR_ QFPDGVSFHGGAWFPLPAAQRPVFFFDAFAQAKNN--DKISIANNINMCRFDR-------
pt025171_POPTR_ PFQ-----------PMVMNHQQVIYFDAVMKSQCQ------------KTVFDNGYHHHHH
pt036816_POPTR_ PFV----FQQQP--PHVNAVGPVWFLDSTVKPEFV-AQRF-------PVRYDP-------
pt019626_POPTR_ PFQ-----------PMAMNQQQVVYFDAFMKSQYR------------RMVFDHGY--HHH
                 *                    *         :                 :*        

AT1G28370.1     ------------RSESDSSSVVMDV----VRYEGRRVVLDLDLNFPPPPEN-
pt024322_POPTR_ ---TVMVNGGGAQSDSDSSSVV-DYDH---RRDSKGLSLDLDLNLAPPPEVS
pt004210_POPTR_ ---VGLESAGGAQSDSDSSSMV-DCQP-------RRSVLDLDLNLPPPLDA-
pt032466_POPTR_ ---TAMVNGGGVQSDSDSSSVL-DYDH---HHDNKGLSLDLDLNLPPPPEVA
pt025171_POPTR_ PNQPMGFSCGGIQSDSDSSSIVFDLNHQDIKTPRSSVDLDLNLNLPPPPEIA
pt036816_POPTR_ ---VGLE--GGAHSDSDSSSVI-DFKP-------RSSILHLDLNLPPPADA-
pt019626_POPTR_ PNQPVIFSCGGVLSDSDSSSVV-DLNHQDVKTPRRSVDLD--LNLPPPPEIA
                             *:*****:: *              *.  **:.** :
BoxShade v3.31 C (beta, 970507) Output
AT1G28370.1     M A P T V K T A A V K - T N - - - - - - - - - - - - - - - E G N G V R Y R G V R K R P W G R Y A A E I R D P F K K S R V
pt024322_POPTR_    M A P R E R S N N N N S P N S P - - - - - - - - - - - - - - R S E I R F R G V R K R P W G R Y A A E I R D P G K K T R V
pt004210_POPTR_    M A P K K L N A S N S - - - - - - - - G C F K K A S G D H D K K E I H Y R G V R K R P W G R Y A A E I R D P G K K S R V
pt032466_POPTR_    M A P I E K P S S S N - P N S P - - - - - - - - - - - - - T R S E I R F R G V R K R P W G R Y A A E I R D P G K K T R V
pt025171_POPTR_    M A P R E K T A P G K - V N G G T C G G - - - - - - A G G G G K E V H F R G V R K R P W G R Y A A E I R D P G K K S R V
pt036816_POPTR_    M A P K K L N G N D N - - - - - - - - G S L K K A S G D H D K K E I H Y R G V R K R P W G R Y A A E I R D P G K K S R V
pt019626_POPTR_    M A P R E K T A A V K - A S G G G I V G - - - - - - G G G G G K E V H F R G V R K R P W G R Y A A E I R D P S K K S R V
 
AT1G28370.1     W L G T F D T P E E A A R A Y D K R A I E F R G A K A K T N F P - - - C Y N I N A H C L S L - - - - - - - - - - - - - -
pt024322_POPTR_    W L G T F D T A E E A A R A Y D A A A R E F R G A K A K T N F P - - - - - - - - - - - - T I - - - - - - - - - - - - - -
pt004210_POPTR_    W L G T F D T A E E A A K A Y D K A A R E Y R G A K A K T N F P - - - - - - F S G E V V N Y D D - - - - - - - - - - - -
pt032466_POPTR_    W L G T F D T A E E A A R A Y D A A A R E F R G A K A K T N F P - - - - - - - - - - - - T V - - - - - - - - - - - - - -
pt025171_POPTR_    W L G T F D T A E E A A R A Y D A A A R E F R G S K A K T N Y A Y P S Y E N V R K N T I S V D S N H K A S N K N N S C G
pt036816_POPTR_    W L G T F D T A V E A A R A Y D K A A R E Y R G A K A K T N F P - - - - - - I A E K V V D Y D D - - - - - - - - - - - -
pt019626_POPTR_    W L G T F D T A E E A A R A Y D T A A R E F R G S K A K T N F P Y P S C E N V K K N V L S I D S N K K A A S K N N S G G
 
AT1G28370.1     - - - - - - - - - T Q S L S Q S S T V E - - - S S F P - - - - - - - - - - - - N L N - - - - - - - L G S D S - V S S R F
pt024322_POPTR_    - - G E L N P N P T R S P S Q S S T V E - - - S S S P P P P R A A S P P P P L D L T - - - - - - - L N I S R H K P D R Q
pt004210_POPTR_    - - - - - - - - D K Q S S S H S S T V E - - S S S S P V V S A A - - - - - - - - V T R Q V G G G G V G G V V - G M G G F
pt032466_POPTR_    - - G E L I P I P T R S P S Q S S T V E - - - S S S P T H P R A A S P P P P L D L T - - - - - - - L N S A H H N T A R H
pt025171_POPTR_    G G G G G N S N N N Q S P S Q S S T V E F S S S D T P - - - - - - - - - - - L D L N - - - - - - - L G P A V - S T V R L
pt036816_POPTR_    - - - - - - - - E K Q S S S Q S S T V E - - S S S S P V V S A V A - - - - - R D V T R Q - - - - - V G G V V - G T G R F
pt019626_POPTR_    G G G - - - - - N N Q S P S Q S S T V E F C S S D A P - - - - - - - - - - - L D L N - - - - - - - L G P A V - S T V R L
 
AT1G28370.1     P F P - - - - - - - - - - - K I - - - - - Q V - - - - - - - - - K A G - - - - - - - - - - - - M M V F D E - - - - - - -
pt024322_POPTR_    P F P N G V S F P G G A W F P F P A V A R P V F F F D A F A H A K N D I P N N N S I V N N I N M C R F D R - - - - - - -
pt004210_POPTR_    P F V - - - - Y Q Q Q Q - - Q N V N V V A P V W F F D S - V R P E F V - T Q R F - - - - - - - P V R F D Q - - - - - - -
pt032466_POPTR_    Q F P D G V S F H G G A W F P L P A A Q R P V F F F D A F A Q A K N N - - D K I S I A N N I N M C R F D R - - - - - - -
pt025171_POPTR_    P F Q - - - - - - - - - - - P M V M N H Q Q V I Y F D A V M K S Q C Q - - - - - - - - - - - - K T V F D N G Y H H H H H
pt036816_POPTR_    P F V - - - - F Q Q Q P - - P H V N A V G P V W F L D S T V K P E F V - A Q R F - - - - - - - P V R Y D P - - - - - - -
pt019626_POPTR_    P F Q - - - - - - - - - - - P M A M N Q Q Q V V Y F D A F M K S Q Y R - - - - - - - - - - - - R M V F D H G Y - - H H H
 
AT1G28370.1     - - - - - - - - - - - - R S E S D S S S V V M D V - - - - V R Y E G R R V V L D L D L N F P P P P E N -
pt024322_POPTR_    - - - T V M V N G G G A Q S D S D S S S V V - D Y D H - - - R R D S K G L S L D L D L N L A P P P E V S
pt004210_POPTR_    - - - V G L E S A G G A Q S D S D S S S M V - D C Q P - - - - - - - R R S V L D L D L N L P P P L D A -
pt032466_POPTR_    - - - T A M V N G G G V Q S D S D S S S V L - D Y D H - - - H H D N K G L S L D L D L N L P P P P E V A
pt025171_POPTR_    P N Q P M G F S C G G I Q S D S D S S S I V F D L N H Q D I K T P R S S V D L D L N L N L P P P P E I A
pt036816_POPTR_    - - - V G L E - - G G A H S D S D S S S V I - D F K P - - - - - - - R S S I L H L D L N L P P P A D A -
pt019626_POPTR_    P N Q P V I F S C G G V L S D S D S S S V V - D L N H Q D V K T P R R S V D L D - - L N L P P P P E I A
 
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