fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28370.1 GRRVVLDLDLNFPPPPEN at 153/166 in AT1G28370.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022250 MPIPPSLELDLFHRAA in 133/236 AT5G44210.1 1st_not 0.414179104 II
KKAIAFDLDLNCPPPMEV in 224/236
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28370.1     MAP-----TVKTAAVKTN-------------EGNGVRYRGVRKRPWGRYAAEIRDPFKKS
Os022250_Os05t0 MAPRTSDKTMSPAAAATGLALGVGGVAGAAAVGTGQHFRGVRKRPWGRYAAEIRDPAKKS
                ***     *:..**. *.              *.* ::****************** ***

AT1G28370.1     RVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSF-
Os022250_Os05t0 RVWLGTFDTAEEAARAYDAAAREYRGAKAKTNFP-YPNGAPAAGVNSGSSNSSTVE-SFG
                *********.********  * *:********** *  .* . .:... *:***** ** 

AT1G28370.1     -------------PNLNL----------GSDSVSSRFPFPKIQVKAGMMVFDE-------
Os022250_Os05t0 SDVQAPMKAMPIPPSLELDLFHRAAAAAAAGAGGMRFPFEGYPVSHPYYFFGQAAAAAAA
                             *.*:*          .:.: . ****    *.    .*.:       

AT1G28370.1     -------------------RSESDSSSVVMDV-----VRYEGRRVVLDLDLNFPPPPEN
Os022250_Os05t0 SGCRMLKIAPAPVTVAALAQSDSDSSSIV-DLAPSPPAALAKKAIAFDLDLNCPPPMEV
                                   :*:*****:* *:     .    : :.:***** *** *
BoxShade v3.31 C (beta, 970507) Output
AT1G28370.1     M A P - - - - - T V K T A A V K T N - - - - - - - - - - - - - E G N G V R Y R G V R K R P W G R Y A A E I R D P F K K S
Os022250_Os05t0    M A P R T S D K T M S P A A A A T G L A L G V G G V A G A A A V G T G Q H F R G V R K R P W G R Y A A E I R D P A K K S
 
AT1G28370.1     R V W L G T F D T P E E A A R A Y D K R A I E F R G A K A K T N F P C Y N I N A H C L S L T Q S L S Q S S T V E S S F -
Os022250_Os05t0    R V W L G T F D T A E E A A R A Y D A A A R E Y R G A K A K T N F P - Y P N G A P A A G V N S G S S N S S T V E - S F G
 
AT1G28370.1     - - - - - - - - - - - - - P N L N L - - - - - - - - - - G S D S V S S R F P F P K I Q V K A G M M V F D E - - - - - - -
Os022250_Os05t0    S D V Q A P M K A M P I P P S L E L D L F H R A A A A A A A G A G G M R F P F E G Y P V S H P Y Y F F G Q A A A A A A A
 
AT1G28370.1     - - - - - - - - - - - - - - - - - - - R S E S D S S S V V M D V - - - - - V R Y E G R R V V L D L D L N F P P P P E N
Os022250_Os05t0    S G C R M L K I A P A P V T V A A L A Q S D S D S S S I V - D L A P S P P A A L A K K A I A F D L D L N C P P P M E V
 
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