fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28370.1 GRRVVLDLDLNFPPPPEN at 153/166 in AT1G28370.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025944 not found in 348aa AT3G15210.1 1st_not 0.406716417 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28370.1     ----------------------MAPTVK--------------TAAVKTNEGNGVRYRGVR
Sb025944_Sorbi1 SLRLPTPPRSAGRPAHARHLYTMAPRVADKSPLPPATGLGLGVGGVVGGVGMGPHYRGVR
                                      *** *               ...*  . * * :*****

AT1G28370.1     KRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCYNINAHC
Sb025944_Sorbi1 KRPWGRFAAEIRDPAKKSRVWLGTYDTAEEAAKAYDAAAREFRGAKAKTNFPFPSQCAVA
                ******:******* *********:**.****:***  * ************  .  * .

AT1G28370.1     LSLTQSLSQSSTVESSF-----------------PNLNL-------GSDSVSS---RFPF
Sb025944_Sorbi1 AGGAGSPCSNSTVDSSGGASGCAVQAPMQAMPLPPALDLDLFHRAAAVNAVTAGGMRFPF
                 . : * ...***:**                  * *:*       . ::*::   ****

AT1G28370.1     ------------------------------------PKIQVKAGMMVFDERSESDSSSVV
Sb025944_Sorbi1 KGYPVARPTPHQYFFYEQAAAAAAAAAGYRMLKVAPPPVTVAA-----VAQSDSDSSSVV
                                                    * : * *       :*:*******

AT1G28370.1     MDV----VRYEGRRVVLDLDLNFPPPPEN
Sb025944_Sorbi1 DHTPSPPAVTAKKEVGFELDLNWPPPAEN
                 ..    .    :.* ::****:***.**
BoxShade v3.31 C (beta, 970507) Output
AT1G28370.1     - - - - - - - - - - - - - - - - - - - - - - M A P T V K - - - - - - - - - - - - - - T A A V K T N E G N G V R Y R G V R
Sb025944_Sorbi1    S L R L P T P P R S A G R P A H A R H L Y T M A P R V A D K S P L P P A T G L G L G V G G V V G G V G M G P H Y R G V R
 
AT1G28370.1     K R P W G R Y A A E I R D P F K K S R V W L G T F D T P E E A A R A Y D K R A I E F R G A K A K T N F P C Y N I N A H C
Sb025944_Sorbi1    K R P W G R F A A E I R D P A K K S R V W L G T Y D T A E E A A K A Y D A A A R E F R G A K A K T N F P F P S Q C A V A
 
AT1G28370.1     L S L T Q S L S Q S S T V E S S F - - - - - - - - - - - - - - - - - P N L N L - - - - - - - G S D S V S S - - - R F P F
Sb025944_Sorbi1    A G G A G S P C S N S T V D S S G G A S G C A V Q A P M Q A M P L P P A L D L D L F H R A A A V N A V T A G G M R F P F
 
AT1G28370.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P K I Q V K A G M M V F D E R S E S D S S S V V
Sb025944_Sorbi1    K G Y P V A R P T P H Q Y F F Y E Q A A A A A A A A A G Y R M L K V A P P P V T V A A - - - - - V A Q S D S D S S S V V
 
AT1G28370.1     M D V - - - - V R Y E G R R V V L D L D L N F P P P P E N
Sb025944_Sorbi1    D H T P S P P A V T A K K E V G F E L D L N W P P P A E N
 
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