Input
| Putative repression domain
|
|
AT1G28370.1 |
GRRVVLDLDLNFPPPPEN at 153/166 in AT1G28370.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb025944 |
not found in 348aa |
AT3G15210.1 |
1st_not |
0.406716417 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G28370.1 ----------------------MAPTVK--------------TAAVKTNEGNGVRYRGVR
Sb025944_Sorbi1 SLRLPTPPRSAGRPAHARHLYTMAPRVADKSPLPPATGLGLGVGGVVGGVGMGPHYRGVR
*** * ...* . * * :*****
AT1G28370.1 KRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCYNINAHC
Sb025944_Sorbi1 KRPWGRFAAEIRDPAKKSRVWLGTYDTAEEAAKAYDAAAREFRGAKAKTNFPFPSQCAVA
******:******* *********:**.****:*** * ************ . * .
AT1G28370.1 LSLTQSLSQSSTVESSF-----------------PNLNL-------GSDSVSS---RFPF
Sb025944_Sorbi1 AGGAGSPCSNSTVDSSGGASGCAVQAPMQAMPLPPALDLDLFHRAAAVNAVTAGGMRFPF
. : * ...***:** * *:* . ::*:: ****
AT1G28370.1 ------------------------------------PKIQVKAGMMVFDERSESDSSSVV
Sb025944_Sorbi1 KGYPVARPTPHQYFFYEQAAAAAAAAAGYRMLKVAPPPVTVAA-----VAQSDSDSSSVV
* : * * :*:*******
AT1G28370.1 MDV----VRYEGRRVVLDLDLNFPPPPEN
Sb025944_Sorbi1 DHTPSPPAVTAKKEVGFELDLNWPPPAEN
.. . :.* ::****:***.**
BoxShade v3.31 C (beta, 970507) Output
AT1G28370.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
A |
P |
T |
V |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
A |
A |
V |
K |
T |
N |
E |
G |
N |
G |
V |
R |
Y |
R |
G |
V |
R |
Sb025944_Sorbi1 |
S |
L |
R |
L |
P |
T |
P |
P |
R |
S |
A |
G |
R |
P |
A |
H |
A |
R |
H |
L |
Y |
T |
M |
A |
P |
R |
V |
A |
D |
K |
S |
P |
L |
P |
P |
A |
T |
G |
L |
G |
L |
G |
V |
G |
G |
V |
V |
G |
G |
V |
G |
M |
G |
P |
H |
Y |
R |
G |
V |
R |
|
AT1G28370.1 |
K |
R |
P |
W |
G |
R |
Y |
A |
A |
E |
I |
R |
D |
P |
F |
K |
K |
S |
R |
V |
W |
L |
G |
T |
F |
D |
T |
P |
E |
E |
A |
A |
R |
A |
Y |
D |
K |
R |
A |
I |
E |
F |
R |
G |
A |
K |
A |
K |
T |
N |
F |
P |
C |
Y |
N |
I |
N |
A |
H |
C |
Sb025944_Sorbi1 |
K |
R |
P |
W |
G |
R |
F |
A |
A |
E |
I |
R |
D |
P |
A |
K |
K |
S |
R |
V |
W |
L |
G |
T |
Y |
D |
T |
A |
E |
E |
A |
A |
K |
A |
Y |
D |
A |
A |
A |
R |
E |
F |
R |
G |
A |
K |
A |
K |
T |
N |
F |
P |
F |
P |
S |
Q |
C |
A |
V |
A |
|
AT1G28370.1 |
L |
S |
L |
T |
Q |
S |
L |
S |
Q |
S |
S |
T |
V |
E |
S |
S |
F |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
N |
L |
N |
L |
- |
- |
- |
- |
- |
- |
- |
G |
S |
D |
S |
V |
S |
S |
- |
- |
- |
R |
F |
P |
F |
Sb025944_Sorbi1 |
A |
G |
G |
A |
G |
S |
P |
C |
S |
N |
S |
T |
V |
D |
S |
S |
G |
G |
A |
S |
G |
C |
A |
V |
Q |
A |
P |
M |
Q |
A |
M |
P |
L |
P |
P |
A |
L |
D |
L |
D |
L |
F |
H |
R |
A |
A |
A |
V |
N |
A |
V |
T |
A |
G |
G |
M |
R |
F |
P |
F |
|
AT1G28370.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
K |
I |
Q |
V |
K |
A |
G |
M |
M |
V |
F |
D |
E |
R |
S |
E |
S |
D |
S |
S |
S |
V |
V |
Sb025944_Sorbi1 |
K |
G |
Y |
P |
V |
A |
R |
P |
T |
P |
H |
Q |
Y |
F |
F |
Y |
E |
Q |
A |
A |
A |
A |
A |
A |
A |
A |
A |
G |
Y |
R |
M |
L |
K |
V |
A |
P |
P |
P |
V |
T |
V |
A |
A |
- |
- |
- |
- |
- |
V |
A |
Q |
S |
D |
S |
D |
S |
S |
S |
V |
V |
|
AT1G28370.1 |
M |
D |
V |
- |
- |
- |
- |
V |
R |
Y |
E |
G |
R |
R |
V |
V |
L |
D |
L |
D |
L |
N |
F |
P |
P |
P |
P |
E |
N |
Sb025944_Sorbi1 |
D |
H |
T |
P |
S |
P |
P |
A |
V |
T |
A |
K |
K |
E |
V |
G |
F |
E |
L |
D |
L |
N |
W |
P |
P |
P |
A |
E |
N |
|
|