fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28370.1 GRRVVLDLDLNFPPPPEN at 153/166 in AT1G28370.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041517 ADSSPLDLNLAPVAVSS in 112/219 AT5G44210.1 not_not 0.436567164 III
NGSRMFDLDLNHPPPHEI in 206/219
Gm037405 NRRILLDLDLNVPPLPEV in 180/193 AT5G44210.1 not_not 0.432835820 III
Gm034499 NRRVLLDLDLNVPPLPEV in 180/193 AT3G15210.1 not_not 0.417910447 III
Gm036996 ADSSPLDLNLAPAAVAS in 115/222 AT5G44210.1 not_not 0.414179104 III
NGSRIFDLDLNHPPPHEI in 209/222
Gm041516 RRGIPIDLNEPPPMWL in 162/172 AT1G28360.1 not_not 0.402985074 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G28370.1     MAPTV-K-TAAVKTNEGNG-----VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPE
gm041516_Glyma1 MAPSS---SASAS---------REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPE
gm034499_Glyma1 MAPRDSRATAFAGPGPGPSPAHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAE
gm041517_Glyma1 MAPRD-K-TSAVKP--SGNAGVKDLHFRGVRKRPWGRFAAEIRDPAKKTRVWLGTFDTAE
gm037405_Glyma1 MAPRDSRATALIGPGPSLSPAHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAE
gm036996_Glyma1 MAPRDHK-TSNAKANGNGNSGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
                ***     ::               ::**********:******* **:*********.*

AT1G28370.1     EAARAYDKRAIEFRGAKAKTNFPCYN---INAHCLSLTQSLSQSSTVESSFPN-------
gm041516_Glyma1 EAALAYDGAARSLRGAKAKTNFPPAPPLCLDL------NVPSSDHRWPHHVPPRSLVLSD
gm034499_Glyma1 EAARAYDTAAREFRGAKAKTNFPTPSELILNN---NI-RSPSQSSTLDSSSPP-------
gm041517_Glyma1 EAARAYDAAAREFRGPKAKTNFPLPSENFKNA-------SPSQSSTVESSSRDRD-----
gm037405_Glyma1 EAARAYDTAAREFRGAKAKTNFPTPSELILNNNNINA-RSPSQTSTLDSSSPP-------
gm036996_Glyma1 EAARAYDAAAREFRGPKAKTNFPLPLENVKNS-------SPSQSSTVESSSRDRD-----
                *** ***  * .:**.*******       :          *.                 

AT1G28370.1     --------------LNLGSDSVSS-RFPF----------------PKIQ--------VKA
gm041516_Glyma1 FLHTAVLRDIDPPQQPFPPAAAVAHRNPHGGAMPVGGGVQVMEGSPTAS----FLGFVRR
gm034499_Glyma1 -------SPPPPLDLTLTPLSVAV---------TVF---------PVARPVLFFDAFARA
gm041517_Glyma1 -----VAADSSPLDLNLAPVAVSSARFPFRNQFPVFPG-----AVPAANQVMYFDAVLRA
gm037405_Glyma1 --------PPPPLDLTLTPLSSA-----------VF---------PVARPVLFFDAFARA
gm036996_Glyma1 -----VAADSSPLDLNLAPAAVASARFPFQHQFPVFTG-----AVPAANQVLYFDAVLRA
                                : . :                        *            : 

AT1G28370.1     GMMVFDER--------------------SESDSSSVV-----MDVVRYEGRRVVLDLDLN
gm041516_Glyma1 G-----------------------------------------------------IPIDLN
gm034499_Glyma1 DAMIAVSRREMCGFER---PAADFRRNDSDSDYNRRV----------------LLDLDLN
gm041517_Glyma1 G--MAGPRGFAFGYNPHPVAASEYHATTSDSDSSSVIDLNHNEGVVKGNGSR-MFDLDLN
gm037405_Glyma1 DTMVAVSRRETCGFER---PAADFRRGDSDSDYNRRI----------------LLDLDLN
gm036996_Glyma1 G--MAGPRGFAFGYNHHPVAASEFHATTSDSDSSSVIDLNHNEGEVKGNGSR-IFDLDLN
                .                                                     : :***

AT1G28370.1     FPPPPEN-
gm041516_Glyma1 EPPPMWL-
gm034499_Glyma1 VPPLPEVA
gm041517_Glyma1 HPPPHEIA
gm037405_Glyma1 VPPLPEVA
gm036996_Glyma1 HPPPHEIA
                 **
BoxShade v3.31 C (beta, 970507) Output
AT1G28370.1     M A P T V - K - T A A V K T N E G N G - - - - - V R Y R G V R K R P W G R Y A A E I R D P F K K S R V W L G T F D T P E
gm041516_Glyma1    M A P S S - - - S A S A S - - - - - - - - - R E G H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T F D T P E
gm034499_Glyma1    M A P R D S R A T A F A G P G P G P S P A H K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W L G T F D T A E
gm041517_Glyma1    M A P R D - K - T S A V K P - - S G N A G V K D L H F R G V R K R P W G R F A A E I R D P A K K T R V W L G T F D T A E
gm037405_Glyma1    M A P R D S R A T A L I G P G P S L S P A H K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W L G T F D T A E
gm036996_Glyma1    M A P R D H K - T S N A K A N G N G N S G V K E V H F R G V R K R P W G R Y A A E I R D P G K K S R V W L G T F D T A E
 
AT1G28370.1     E A A R A Y D K R A I E F R G A K A K T N F P C Y N - - - I N A H C L S L T Q S L S Q S S T V E S S F P N - - - - - - -
gm041516_Glyma1    E A A L A Y D G A A R S L R G A K A K T N F P P A P P L C L D L - - - - - - N V P S S D H R W P H H V P P R S L V L S D
gm034499_Glyma1    E A A R A Y D T A A R E F R G A K A K T N F P T P S E L I L N N - - - N I - R S P S Q S S T L D S S S P P - - - - - - -
gm041517_Glyma1    E A A R A Y D A A A R E F R G P K A K T N F P L P S E N F K N A - - - - - - - S P S Q S S T V E S S S R D R D - - - - -
gm037405_Glyma1    E A A R A Y D T A A R E F R G A K A K T N F P T P S E L I L N N N N I N A - R S P S Q T S T L D S S S P P - - - - - - -
gm036996_Glyma1    E A A R A Y D A A A R E F R G P K A K T N F P L P L E N V K N S - - - - - - - S P S Q S S T V E S S S R D R D - - - - -
 
AT1G28370.1     - - - - - - - - - - - - - - L N L G S D S V S S - R F P F - - - - - - - - - - - - - - - - P K I Q - - - - - - - - V K A
gm041516_Glyma1    F L H T A V L R D I D P P Q Q P F P P A A A V A H R N P H G G A M P V G G G V Q V M E G S P T A S - - - - F L G F V R R
gm034499_Glyma1    - - - - - - - S P P P P L D L T L T P L S V A V - - - - - - - - - T V F - - - - - - - - - P V A R P V L F F D A F A R A
gm041517_Glyma1    - - - - - V A A D S S P L D L N L A P V A V S S A R F P F R N Q F P V F P G - - - - - A V P A A N Q V M Y F D A V L R A
gm037405_Glyma1    - - - - - - - - P P P P L D L T L T P L S S A - - - - - - - - - - - V F - - - - - - - - - P V A R P V L F F D A F A R A
gm036996_Glyma1    - - - - - V A A D S S P L D L N L A P A A V A S A R F P F Q H Q F P V F T G - - - - - A V P A A N Q V L Y F D A V L R A
 
AT1G28370.1     G M M V F D E R - - - - - - - - - - - - - - - - - - - - S E S D S S S V V - - - - - M D V V R Y E G R R V V L D L D L N
gm041516_Glyma1    G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I P I D L N
gm034499_Glyma1    D A M I A V S R R E M C G F E R - - - P A A D F R R N D S D S D Y N R R V - - - - - - - - - - - - - - - - L L D L D L N
gm041517_Glyma1    G - - M A G P R G F A F G Y N P H P V A A S E Y H A T T S D S D S S S V I D L N H N E G V V K G N G S R - M F D L D L N
gm037405_Glyma1    D T M V A V S R R E T C G F E R - - - P A A D F R R G D S D S D Y N R R I - - - - - - - - - - - - - - - - L L D L D L N
gm036996_Glyma1    G - - M A G P R G F A F G Y N H H P V A A S E F H A T T S D S D S S S V I D L N H N E G E V K G N G S R - I F D L D L N
 
AT1G28370.1     F P P P P E N -
gm041516_Glyma1    E P P P M W L -
gm034499_Glyma1    V P P L P E V A
gm041517_Glyma1    H P P P H E I A
gm037405_Glyma1    V P P L P E V A
gm036996_Glyma1    H P P P H E I A
 
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