fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28370.1 GRRVVLDLDLNFPPPPEN at 153/166 in AT1G28370.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016091 PHRKVLDLDLNVPPPPEV in 170/183 AT5G44210.1 1st_not 0.444029850 II
Gm041517 ADSSPLDLNLAPVAVSS in 112/219 AT5G44210.1 not_not 0.436567164 III
NGSRMFDLDLNHPPPHEI in 206/219
Gm037405 NRRILLDLDLNVPPLPEV in 180/193 AT5G44210.1 not_not 0.432835820 III
Gm034499 NRRVLLDLDLNVPPLPEV in 180/193 AT3G15210.1 not_not 0.417910447 III
Gm036996 ADSSPLDLNLAPAAVAS in 115/222 AT5G44210.1 not_not 0.414179104 III
NGSRIFDLDLNHPPPHEI in 209/222
Gm041516 RRGIPIDLNEPPPMWL in 162/172 AT1G28360.1 not_not 0.402985074 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G28370.1     MAPTV--KTAAVKTNEGNG-------VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDT
gm036996_Glyma1 MAPRD-HKTSNAKAN-GNG-NSGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT
gm034499_Glyma1 MAPRD-SRATAFAGP-GPGPSPAHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDT
gm037405_Glyma1 MAPRD-SRATALIGP-GPSLSPAHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDT
gm016091_Glyma0 MAPRDINRSNVVVVA-GVS-NPTHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDT
gm041516_Glyma1 MAPSS-----------SAS---ASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDT
gm041517_Glyma1 MAPRD--KTSAVKP---SG-NAGVKDLHFRGVRKRPWGRFAAEIRDPAKKTRVWLGTFDT
                ***               .        ::**********:******* **:*********

AT1G28370.1     PEEAARAYDKRAIEFRGAKAKTNFPCY--------NINAHCLSLTQSLSQSSTVESSFPN
gm036996_Glyma1 AEEAARAYDAAAREFRGPKAKTNFPLPLE------NVKN------SSPSQSSTVESSSRD
gm034499_Glyma1 AEEAARAYDTAAREFRGAKAKTNFPTPSELILNN---NI------RSPSQSSTLDSSSPP
gm037405_Glyma1 AEEAARAYDTAAREFRGAKAKTNFPTPSELILNNNNINA------RSPSQTSTLDSSSPP
gm016091_Glyma0 AEEAARAYDTAAREFRGTKAKTNFPTHAA--------AA------RSPSQSSTLDSSSPP
gm041516_Glyma1 PEEAALAYDGAARSLRGAKAKTNFPPAPPLCL---DLNV--------PSSDHRWPHHVPP
gm041517_Glyma1 AEEAARAYDAAAREFRGPKAKTNFPLPSE------NFKN------ASPSQSSTVESSSRD
                .**** ***  * .:**.*******                       *.          

AT1G28370.1     -------------------------LNL-GSDSVSS-RFPF-----------PKIQ----
gm036996_Glyma1 R--------------DVAADSSPLDLNL-APAAVASARFPFQHQFPVFTGAVPAANQVLY
gm034499_Glyma1 S------------------PPPPLDLTL-TPLSVAV---------TVF----PVARPVLF
gm037405_Glyma1 -------------------PPPPLDLTL-TPLSSA-----------VF----PVARPVLF
gm016091_Glyma0 ----------------------PLDLTLAAPLTAAGA--------LVF----PVARPVVF
gm041516_Glyma1 RSLVLSDFLHTAVLRDIDPPQQPF-----PPAAAVAHRNPHG-------GAMPVGGGVQV
gm041517_Glyma1 R--------------DVAADSSPLDLNL-APVAVSSARFPFRNQFPVFPGAVPAANQVMY
                                              . :                   *       

AT1G28370.1     ----VKAGMMV---------FD-----------ERSESDSSSVVMDVVRYEG-----RRV
gm036996_Glyma1 FDAVLRAGMAGP--RGFAFGYNHHPVAASEFHATTSDSDSSSV-IDLNHNEGEVKGNGSR
gm034499_Glyma1 FDAFARADAMIAVSRREMCGFE-RPAAD------FRRNDSDS---DYNR---------RV
gm037405_Glyma1 FDAFARADTMVAVSRRETCGFE-RPAAD------FRRGDSDS---DYNR---------RI
gm016091_Glyma0 FDAFARAEVRAS--------FD-LPVAG------FSDSDSSSV-VDYERVP------HRK
gm041516_Glyma1 MEG--------------------SPTAS-------------------------FLGFVRR
gm041517_Glyma1 FDAVLRAGMAGP--RGFAFGYNPHPVAASEYHATTSDSDSSSV-IDLNHNEGVVKGNGSR
                                                                            

AT1G28370.1     VLDLDLNFPPPPEN-
gm036996_Glyma1 IFDLDLNHPPPHEIA
gm034499_Glyma1 LLDLDLNVPPLPEVA
gm037405_Glyma1 LLDLDLNVPPLPEVA
gm016091_Glyma0 VLDLDLNVPPPPEVA
gm041516_Glyma1 GIPIDLNEPPPMWL-
gm041517_Glyma1 MFDLDLNHPPPHEIA
                 : :*** **
BoxShade v3.31 C (beta, 970507) Output
AT1G28370.1     M A P T V - - K T A A V K T N E G N G - - - - - - - V R Y R G V R K R P W G R Y A A E I R D P F K K S R V W L G T F D T
gm036996_Glyma1    M A P R D - H K T S N A K A N - G N G - N S G V K E V H F R G V R K R P W G R Y A A E I R D P G K K S R V W L G T F D T
gm034499_Glyma1    M A P R D - S R A T A F A G P - G P G P S P A H K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W L G T F D T
gm037405_Glyma1    M A P R D - S R A T A L I G P - G P S L S P A H K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W L G T F D T
gm016091_Glyma0    M A P R D I N R S N V V V V A - G V S - N P T H K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W L G T F D T
gm041516_Glyma1    M A P S S - - - - - - - - - - - S A S - - - A S R E G H Y R G V R K R P W G R Y A A E I R D P W K K T R V W L G T F D T
gm041517_Glyma1    M A P R D - - K T S A V K P - - - S G - N A G V K D L H F R G V R K R P W G R F A A E I R D P A K K T R V W L G T F D T
 
AT1G28370.1     P E E A A R A Y D K R A I E F R G A K A K T N F P C Y - - - - - - - - N I N A H C L S L T Q S L S Q S S T V E S S F P N
gm036996_Glyma1    A E E A A R A Y D A A A R E F R G P K A K T N F P L P L E - - - - - - N V K N - - - - - - S S P S Q S S T V E S S S R D
gm034499_Glyma1    A E E A A R A Y D T A A R E F R G A K A K T N F P T P S E L I L N N - - - N I - - - - - - R S P S Q S S T L D S S S P P
gm037405_Glyma1    A E E A A R A Y D T A A R E F R G A K A K T N F P T P S E L I L N N N N I N A - - - - - - R S P S Q T S T L D S S S P P
gm016091_Glyma0    A E E A A R A Y D T A A R E F R G T K A K T N F P T H A A - - - - - - - - A A - - - - - - R S P S Q S S T L D S S S P P
gm041516_Glyma1    P E E A A L A Y D G A A R S L R G A K A K T N F P P A P P L C L - - - D L N V - - - - - - - - P S S D H R W P H H V P P
gm041517_Glyma1    A E E A A R A Y D A A A R E F R G P K A K T N F P L P S E - - - - - - N F K N - - - - - - A S P S Q S S T V E S S S R D
 
AT1G28370.1     - - - - - - - - - - - - - - - - - - - - - - - - - L N L - G S D S V S S - R F P F - - - - - - - - - - - P K I Q - - - -
gm036996_Glyma1    R - - - - - - - - - - - - - - D V A A D S S P L D L N L - A P A A V A S A R F P F Q H Q F P V F T G A V P A A N Q V L Y
gm034499_Glyma1    S - - - - - - - - - - - - - - - - - - P P P P L D L T L - T P L S V A V - - - - - - - - - T V F - - - - P V A R P V L F
gm037405_Glyma1    - - - - - - - - - - - - - - - - - - - P P P P L D L T L - T P L S S A - - - - - - - - - - - V F - - - - P V A R P V L F
gm016091_Glyma0    - - - - - - - - - - - - - - - - - - - - - - P L D L T L A A P L T A A G A - - - - - - - - L V F - - - - P V A R P V V F
gm041516_Glyma1    R S L V L S D F L H T A V L R D I D P P Q Q P F - - - - - P P A A A V A H R N P H G - - - - - - - G A M P V G G G V Q V
gm041517_Glyma1    R - - - - - - - - - - - - - - D V A A D S S P L D L N L - A P V A V S S A R F P F R N Q F P V F P G A V P A A N Q V M Y
 
AT1G28370.1     - - - - V K A G M M V - - - - - - - - - F D - - - - - - - - - - - E R S E S D S S S V V M D V V R Y E G - - - - - R R V
gm036996_Glyma1    F D A V L R A G M A G P - - R G F A F G Y N H H P V A A S E F H A T T S D S D S S S V - I D L N H N E G E V K G N G S R
gm034499_Glyma1    F D A F A R A D A M I A V S R R E M C G F E - R P A A D - - - - - - F R R N D S D S - - - D Y N R - - - - - - - - - R V
gm037405_Glyma1    F D A F A R A D T M V A V S R R E T C G F E - R P A A D - - - - - - F R R G D S D S - - - D Y N R - - - - - - - - - R I
gm016091_Glyma0    F D A F A R A E V R A S - - - - - - - - F D - L P V A G - - - - - - F S D S D S S S V - V D Y E R V P - - - - - - H R K
gm041516_Glyma1    M E G - - - - - - - - - - - - - - - - - - - - S P T A S - - - - - - - - - - - - - - - - - - - - - - - - - F L G F V R R
gm041517_Glyma1    F D A V L R A G M A G P - - R G F A F G Y N P H P V A A S E Y H A T T S D S D S S S V - I D L N H N E G V V K G N G S R
 
AT1G28370.1     V L D L D L N F P P P P E N -
gm036996_Glyma1    I F D L D L N H P P P H E I A
gm034499_Glyma1    L L D L D L N V P P L P E V A
gm037405_Glyma1    L L D L D L N V P P L P E V A
gm016091_Glyma0    V L D L D L N V P P P P E V A
gm041516_Glyma1    G I P I D L N E P P P M W L -
gm041517_Glyma1    M F D L D L N H P P P H E I A
 
0