fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022821 not found in 314aa AT4G28500.1 1st_not 0.482549317 II
Sb025585 not found in 394aa AT4G28500.1 1st_not 0.505311077 II
Gm036334 not found in 312aa AT4G28500.1 1st_not 0.534142640 II
Pt020283 not found in 313aa AT4G28500.1 1st_not 0.529590288 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G28470.1     -------------MSWCDGSDDNYDLNLE-RVSNTDHPSVQLKDQSQSCVTSRPDSKISA
pt020283_POPTR_ -------------MTWCNNNSED-----E-RVIQLV----TSNPKEDTFVAA-----KTE
gm036334_Glyma1 -------------MTWCNDSDEE-----R-GIDQLVAPAITPTSTNNTTVLTHDHHRKPT
Sb025585_Sorbi1 RGRDRSSSSSSTAMTWCNSFNDV-----R-AVENNLATAAAVAAAKKQQQAS------SH
Os022821_Os05t0 -------------MTWCNSFSDV-----RTAVDSSLSPAAAVAAAAGKKAAA------SL
                             *:**:. .:      .  : .                 :      . 

AT1G28470.1     ETPITTCPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSSDKRKLH
pt020283_POPTR_ EIRRITCPSCGHNFEIQ--DQGGIIHDLPGLPAGVKFDPTDQEILEHLEAKVLSDRRKLH
gm036334_Glyma1 EIRTITCPSCGHNIEFQ--DQTG-INDLPGLPAGVKFDPNDQEILEHLEAKVFSDVPKLH
Sb025585_Sorbi1 VNLIRTCPSCGHRAQYEQVQAAATIQDLPGLPAGVKFDPTDQELLEHLEGKARPDARKLH
Os022821_Os05t0 AVLVKMCPSCGHRARYE--QETTTIQDLPGLPAGVKFDPTDQELLEHLEGKARPDSRKLH
                      ******. . .  :    *:***.*********.*:*:* ***.*. .*  ***

AT1G28470.1     PLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVSTDE-E
pt020283_POPTR_ PLIDEFIPTIEGENGICYSHPEKLPGVSNDGQIRHFFHRPSKAYTTGTRKRRKVHTDD-D
gm036334_Glyma1 PLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDK-E
Sb025585_Sorbi1 PLIDEFIPTIEGENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDE-Q
Os022821_Os05t0 PLVDEFIPTIEGENGICYTHPERLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHSDEVD
                **:******:********:***:****.:** :********************* :*. :

AT1G28470.1     GHETRWHKTGKTRPVLSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKD
pt020283_POPTR_ GSETRWHKTGKTRPVFAGGTVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKD
gm036334_Glyma1 GSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQQKPEKTNWVMHQYHLGTSEEEKD
Sb025585_Sorbi1 GGETRWHKTGKTRPVFTNGKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKD
Os022821_Os05t0 GGETRWHKTGKTRPVMANGRPRGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEERD
                * *************:  .   *:***********:*:***************..*:*:*

AT1G28470.1     GEPVLSKVFYQTQPRQCGS----------------------------------MEPKPKN
pt020283_POPTR_ GELVVSKVFYQTQPRQCSS-----SIKDS---------IDNKSTNQSGDHIDNIHPLAKN
gm036334_Glyma1 GELVVSKIFYQTQPRQCG---------------------NNSIIKQ--DLYDEERLISNN
Sb025585_Sorbi1 GELVVSKVFYQTQPRQCGS--GSATAKDV-VPLAAGLATTDHHHHHHHHHHDDDDGGNGG
Os022821_Os05t0 GELVVSKVFFQTQPRQCGSTAAAAAAKEASAAVAAAVVNSNYSIVHGHQ------GGGGG
                ** *:**:*:*******.                                         .

AT1G28470.1     L----VNLNRFSYENIQAGFGYEH----GGK--SEETTQVIRELVVREGDGSCSFLSFTC
pt020283_POPTR_ S----TGLLDQFYN--RAYISYDH-----GNHSSEIPPQFLPNLVV-QGDGS-SYIRLAA
gm036334_Glyma1 A----SALMD-YYN--PSFINYDQL---GGRSNRESSAQLIPNLAM-QGDSS-SFIRLAM
Sb025585_Sorbi1 S----AGIV-DFYSP-AALIGYNQAVAPTNRAAAAASAHLMPNFEVHTTAGTAGF-----
Os022821_Os05t0 SFLKEANVVHEFYDP-AATMGYR---------PPAPAAHFAPNFAVHAARNSFG------
                       :    *.   : :.*              ..:.  :: :    .: .      

AT1G28470.1     DASKGKESFMKNQ
pt020283_POPTR_ ETSKGK--LQRKQ
gm036334_Glyma1 DATKAM--LDRK-
Sb025585_Sorbi1 ----GP-------
Os022821_Os05t0 ----GP-------
                    .
BoxShade v3.31 C (beta, 970507) Output
AT1G28470.1     - - - - - - - - - - - - - M S W C D G S D D N Y D L N L E - R V S N T D H P S V Q L K D Q S Q S C V T S R P D S K I S A
pt020283_POPTR_    - - - - - - - - - - - - - M T W C N N N S E D - - - - - E - R V I Q L V - - - - T S N P K E D T F V A A - - - - - K T E
gm036334_Glyma1    - - - - - - - - - - - - - M T W C N D S D E E - - - - - R - G I D Q L V A P A I T P T S T N N T T V L T H D H H R K P T
Sb025585_Sorbi1    R G R D R S S S S S S T A M T W C N S F N D V - - - - - R - A V E N N L A T A A A V A A A K K Q Q Q A S - - - - - - S H
Os022821_Os05t0    - - - - - - - - - - - - - M T W C N S F S D V - - - - - R T A V D S S L S P A A A V A A A A G K K A A A - - - - - - S L
 
AT1G28470.1     E T P I T T C P S C G H K L H H H Q D D Q V G S I K D L P S L P A G V K F D P S D K E I L M H L E A K V S S D K R K L H
pt020283_POPTR_    E I R R I T C P S C G H N F E I Q - - D Q G G I I H D L P G L P A G V K F D P T D Q E I L E H L E A K V L S D R R K L H
gm036334_Glyma1    E I R T I T C P S C G H N I E F Q - - D Q T G - I N D L P G L P A G V K F D P N D Q E I L E H L E A K V F S D V P K L H
Sb025585_Sorbi1    V N L I R T C P S C G H R A Q Y E Q V Q A A A T I Q D L P G L P A G V K F D P T D Q E L L E H L E G K A R P D A R K L H
Os022821_Os05t0    A V L V K M C P S C G H R A R Y E - - Q E T T T I Q D L P G L P A G V K F D P T D Q E L L E H L E G K A R P D S R K L H
 
AT1G28470.1     P L I D E F I P T L E G E N G I C Y T H P E K L P G V S K D G Q V R H F F H R P S K A Y T T G T R K R R K V S T D E - E
pt020283_POPTR_    P L I D E F I P T I E G E N G I C Y S H P E K L P G V S N D G Q I R H F F H R P S K A Y T T G T R K R R K V H T D D - D
gm036334_Glyma1    P L I D E F I P T L E G E N G I C Y T H P E K L P G V S K D G Q I R H F F H R P S K A Y T T G T R K R R K V H T D K - E
Sb025585_Sorbi1    P L I D E F I P T I E G E N G I C Y T H P E R L P G V G K D G L I R H F F H R P S K A Y T T G T R K R R K V H T D E - Q
Os022821_Os05t0    P L V D E F I P T I E G E N G I C Y T H P E R L P G V S K D G L V R H F F H R P S K A Y T T G T R K R R K V H S D E V D
 
AT1G28470.1     G H E T R W H K T G K T R P V L S Q S G E T G F K K I L V L Y T N Y G R Q K K P E K T N W V M H Q Y H L G S S E D E K D
pt020283_POPTR_    G S E T R W H K T G K T R P V F A G G T V K G F K K I L V L Y T N Y G R Q R K P E K T N W V M H Q Y H L G N N E E E K D
gm036334_Glyma1    G S E T R W H K T G K T R P V F V G G A V K G F K K I L V L Y T N Y G R Q Q K P E K T N W V M H Q Y H L G T S E E E K D
Sb025585_Sorbi1    G G E T R W H K T G K T R P V F T N G K L K G Y K K I L V L Y T N Y G K Q R K P E K T N W V M H Q Y H L G S D E E E K D
Os022821_Os05t0    G G E T R W H K T G K T R P V M A N G R P R G Y K K I L V L Y T N Y G K Q R K P E K T N W V M H Q Y H L G S D E E E R D
 
AT1G28470.1     G E P V L S K V F Y Q T Q P R Q C G S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E P K P K N
pt020283_POPTR_    G E L V V S K V F Y Q T Q P R Q C S S - - - - - S I K D S - - - - - - - - - I D N K S T N Q S G D H I D N I H P L A K N
gm036334_Glyma1    G E L V V S K I F Y Q T Q P R Q C G - - - - - - - - - - - - - - - - - - - - - N N S I I K Q - - D L Y D E E R L I S N N
Sb025585_Sorbi1    G E L V V S K V F Y Q T Q P R Q C G S - - G S A T A K D V - V P L A A G L A T T D H H H H H H H H H H D D D D G G N G G
Os022821_Os05t0    G E L V V S K V F F Q T Q P R Q C G S T A A A A A A K E A S A A V A A A V V N S N Y S I V H G H Q - - - - - - G G G G G
 
AT1G28470.1     L - - - - V N L N R F S Y E N I Q A G F G Y E H - - - - G G K - - S E E T T Q V I R E L V V R E G D G S C S F L S F T C
pt020283_POPTR_    S - - - - T G L L D Q F Y N - - R A Y I S Y D H - - - - - G N H S S E I P P Q F L P N L V V - Q G D G S - S Y I R L A A
gm036334_Glyma1    A - - - - S A L M D - Y Y N - - P S F I N Y D Q L - - - G G R S N R E S S A Q L I P N L A M - Q G D S S - S F I R L A M
Sb025585_Sorbi1    S - - - - A G I V - D F Y S P - A A L I G Y N Q A V A P T N R A A A A A S A H L M P N F E V H T T A G T A G F - - - - -
Os022821_Os05t0    S F L K E A N V V H E F Y D P - A A T M G Y R - - - - - - - - - P P A P A A H F A P N F A V H A A R N S F G - - - - - -
 
AT1G28470.1     D A S K G K E S F M K N Q
pt020283_POPTR_    E T S K G K - - L Q R K Q
gm036334_Glyma1    D A T K A M - - L D R K -
Sb025585_Sorbi1    - - - - G P - - - - - - -
Os022821_Os05t0    - - - - G P - - - - - - -
 
0