fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020283 not found in 313aa AT4G28500.1 1st_not 0.529590288 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28470.1     MSWCDGSDDNYDLNLERVSNTDHPSVQLKDQSQSCVTSRP--DSKISAETP---ITTCPS
pt020283_POPTR_ MTWCNNNSED-----ERV-------IQL-------VTSNPKEDTFVAAKTEEIRRITCPS
                *:**:...::     ***       :**       ***.*  *: ::*:*      ****

AT1G28470.1     CGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSSDKRKLHPLIDEFIPT
pt020283_POPTR_ CGHNFEIQ--DQGGIIHDLPGLPAGVKFDPTDQEILEHLEAKVLSDRRKLHPLIDEFIPT
                ***::. :  ** * *:***.*********:*:*** ****** **:*************

AT1G28470.1     LEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTG
pt020283_POPTR_ IEGENGICYSHPEKLPGVSNDGQIRHFFHRPSKAYTTGTRKRRKVHTDDDGSETRWHKTG
                :********:*********:***:********************* **::* ********

AT1G28470.1     KTRPVLSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPVLSKVFY
pt020283_POPTR_ KTRPVFAGGTVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFY
                *****:: .  .***************:***************..*:***** *:*****

AT1G28470.1     QTQPRQCGS--------------------MEPKPKNLVNLNRFSYENIQAGFGYEHGGKS
pt020283_POPTR_ QTQPRQCSSSIKDSIDNKSTNQSGDHIDNIHPLAKNSTGLLDQFYN--RAYISYDHGNHS
                *******.*                    :.* .** ..*    *:  :* :.*:**.:*

AT1G28470.1     EET-TQVIRELVVREGDGSCSFLSFTCDASKGKESFMKNQ
pt020283_POPTR_ SEIPPQFLPNLVV-QGDGS-SYIRLAAETSKGK--LQRKQ
                .*  .*.: :*** :**** *:: ::.::****  : ::*
BoxShade v3.31 C (beta, 970507) Output
AT1G28470.1     M S W C D G S D D N Y D L N L E R V S N T D H P S V Q L K D Q S Q S C V T S R P - - D S K I S A E T P - - - I T T C P S
pt020283_POPTR_    M T W C N N N S E D - - - - - E R V - - - - - - - I Q L - - - - - - - V T S N P K E D T F V A A K T E E I R R I T C P S
 
AT1G28470.1     C G H K L H H H Q D D Q V G S I K D L P S L P A G V K F D P S D K E I L M H L E A K V S S D K R K L H P L I D E F I P T
pt020283_POPTR_    C G H N F E I Q - - D Q G G I I H D L P G L P A G V K F D P T D Q E I L E H L E A K V L S D R R K L H P L I D E F I P T
 
AT1G28470.1     L E G E N G I C Y T H P E K L P G V S K D G Q V R H F F H R P S K A Y T T G T R K R R K V S T D E E G H E T R W H K T G
pt020283_POPTR_    I E G E N G I C Y S H P E K L P G V S N D G Q I R H F F H R P S K A Y T T G T R K R R K V H T D D D G S E T R W H K T G
 
AT1G28470.1     K T R P V L S Q S G E T G F K K I L V L Y T N Y G R Q K K P E K T N W V M H Q Y H L G S S E D E K D G E P V L S K V F Y
pt020283_POPTR_    K T R P V F A G G T V K G F K K I L V L Y T N Y G R Q R K P E K T N W V M H Q Y H L G N N E E E K D G E L V V S K V F Y
 
AT1G28470.1     Q T Q P R Q C G S - - - - - - - - - - - - - - - - - - - - M E P K P K N L V N L N R F S Y E N I Q A G F G Y E H G G K S
pt020283_POPTR_    Q T Q P R Q C S S S I K D S I D N K S T N Q S G D H I D N I H P L A K N S T G L L D Q F Y N - - R A Y I S Y D H G N H S
 
AT1G28470.1     E E T - T Q V I R E L V V R E G D G S C S F L S F T C D A S K G K E S F M K N Q
pt020283_POPTR_    S E I P P Q F L P N L V V - Q G D G S - S Y I R L A A E T S K G K - - L Q R K Q
 
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