fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000796 not found in 433aa AT4G29230.1 not_not 0.417298937 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28470.1     MSWCDGSDDNYDLNLERVSNTDHPSVQLKDQSQSCVTSRPDSKISAETPITTCPSCGHKL
Os000796_Os01t0 ------------MNRGHISSSELIDAKLEERRISTAKH--------------CPSCGNKL
                            :*  ::*.::  ..:*:::  * ..               *****:**

AT1G28470.1     HHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSSDKRKLHPLIDEFIPTLEGEN
Os000796_Os01t0 -DCKPDWVG-------LPAGVKFDPTDQELIEHLEAKVREEGSRSHPLIDEFIPTIEGED
                 . : * **       *********:*:*:: ****** .:  : **********:***:

AT1G28470.1     GICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVST--DEEGHETRWHKTGKTR
Os000796_Os01t0 GICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQTECDVQKGETRWHKTGKTR
                *************::**  :*******************:.*  * :  ***********

AT1G28470.1     PVLSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPVLSKVFYQTQ
Os000796_Os01t0 PVMVSGRQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGDLEEEKEGELVVCKIFYQTQ
                **: .. :.* *********:*:::***************. *:**:** *:.*:*****

AT1G28470.1     PRQC----------------------------------GSMEPKPKNLVN----------
Os000796_Os01t0 PRQCSWSSDRGGGAAATASAVTTAAVQQDQQRRRDSGSGSCSSTRDHEVSATSYSTAGYA
                ****                                  ** ... .: *.          

AT1G28470.1     -------------LNRFSYENIQAGF------------------GYEHGGKSEE------
Os000796_Os01t0 VAAAVEMQHLKHAADHFSFAPFRKSFEEVGISGDQVHSNQLGRSEQQHAGQEQQPHRPLL
                              ::**:  :: .*                    :*.*:.::      

AT1G28470.1     --TTQV------------------------------------------------------
Os000796_Os01t0 ATTTAVPATAFLISRPTNPVSNIVPPAMQHASVVLDHDQFHVPAILLHHDKFQQQQQKLD
                  ** *                                                      

AT1G28470.1     -----IRELVVREGDGSCSFLSFTCDASKGKESFMKNQ-------------------
Os000796_Os01t0 RRSAGLEELIM-----GC-----TSSSTKGEASIPHSQETEWPYQPYWTPDNQDHHG
                     :.**::     .*     *..::**: *: :.*
BoxShade v3.31 C (beta, 970507) Output
AT1G28470.1     M S W C D G S D D N Y D L N L E R V S N T D H P S V Q L K D Q S Q S C V T S R P D S K I S A E T P I T T C P S C G H K L
Os000796_Os01t0    - - - - - - - - - - - - M N R G H I S S S E L I D A K L E E R R I S T A K H - - - - - - - - - - - - - - C P S C G N K L
 
AT1G28470.1     H H H Q D D Q V G S I K D L P S L P A G V K F D P S D K E I L M H L E A K V S S D K R K L H P L I D E F I P T L E G E N
Os000796_Os01t0    - D C K P D W V G - - - - - - - L P A G V K F D P T D Q E L I E H L E A K V R E E G S R S H P L I D E F I P T I E G E D
 
AT1G28470.1     G I C Y T H P E K L P G V S K D G Q V R H F F H R P S K A Y T T G T R K R R K V S T - - D E E G H E T R W H K T G K T R
Os000796_Os01t0    G I C Y T H P E K L P G V T R D G L S K H F F H R P S K A Y T T G T R K R R K I Q T E C D V Q K G E T R W H K T G K T R
 
AT1G28470.1     P V L S Q S G E T G F K K I L V L Y T N Y G R Q K K P E K T N W V M H Q Y H L G S S E D E K D G E P V L S K V F Y Q T Q
Os000796_Os01t0    P V M V S G R Q K G C K K I L V L Y T N F G K H R K P E K T N W V M H Q Y H L G D L E E E K E G E L V V C K I F Y Q T Q
 
AT1G28470.1     P R Q C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G S M E P K P K N L V N - - - - - - - - - -
Os000796_Os01t0    P R Q C S W S S D R G G G A A A T A S A V T T A A V Q Q D Q Q R R R D S G S G S C S S T R D H E V S A T S Y S T A G Y A
 
AT1G28470.1     - - - - - - - - - - - - - L N R F S Y E N I Q A G F - - - - - - - - - - - - - - - - - - G Y E H G G K S E E - - - - - -
Os000796_Os01t0    V A A A V E M Q H L K H A A D H F S F A P F R K S F E E V G I S G D Q V H S N Q L G R S E Q Q H A G Q E Q Q P H R P L L
 
AT1G28470.1     - - T T Q V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os000796_Os01t0    A T T T A V P A T A F L I S R P T N P V S N I V P P A M Q H A S V V L D H D Q F H V P A I L L H H D K F Q Q Q Q Q K L D
 
AT1G28470.1     - - - - - I R E L V V R E G D G S C S F L S F T C D A S K G K E S F M K N Q - - - - - - - - - - - - - - - - - - -
Os000796_Os01t0    R R S A G L E E L I M - - - - - G C - - - - - T S S S T K G E A S I P H S Q E T E W P Y Q P Y W T P D N Q D H H G
 
0