fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025585 not found in 394aa AT4G28500.1 1st_not 0.505311077 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28470.1     -------------MSWCDGSDDNYDLNLERVSN---TDHPSVQLKDQSQSCVTSRPDSKI
Sb025585_Sorbi1 RGRDRSSSSSSTAMTWCNSFND-----VRAVENNLATAAAVAAAKKQQQAS---------
                             *:**:. :*     :. *.*   *  . .  *.*.*:.         

AT1G28470.1     SAETPITTCPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSSDKRK
Sb025585_Sorbi1 SHVNLIRTCPSCGHRAQYEQVQAAATIQDLPGLPAGVKFDPTDQELLEHLEGKARPDARK
                *  . * *******: ::.* : ..:*:***.*********:*:*:* ***.*. .* **

AT1G28470.1     LHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVSTDE
Sb025585_Sorbi1 LHPLIDEFIPTIEGENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDE
                ***********:************:****.*** :********************* ***

AT1G28470.1     EGHETRWHKTGKTRPVLSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEK
Sb025585_Sorbi1 QGGETRWHKTGKTRPVFTNGKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEK
                :* *************:::.  .*:***********:*:****************.*:**

AT1G28470.1     DGEPVLSKVFYQTQPRQCGSMEPKPKNLVNL-------------NRFSYENIQAGFGYEH
Sb025585_Sorbi1 DGELVVSKVFYQTQPRQCGSGSATAKDVVPLAAGLATTDHHHHHHHHHHDDDDGGNGGSA
                *** *:************** ....*::* *             ::. ::: :.* * . 

AT1G28470.1     G-----------GKSEETTQVIRELVVREGDGSCSFL-SFTCDASKGKESFMKNQ
Sb025585_Sorbi1 GIVDFYSPAALIGYNQAVAPTNRAAAA----ASAHLMPNFEVHTTAGTAGFGP--
                *           * .: .: . *  ..    .*. :: .*  .:: *. .*
BoxShade v3.31 C (beta, 970507) Output
AT1G28470.1     - - - - - - - - - - - - - M S W C D G S D D N Y D L N L E R V S N - - - T D H P S V Q L K D Q S Q S C V T S R P D S K I
Sb025585_Sorbi1    R G R D R S S S S S S T A M T W C N S F N D - - - - - V R A V E N N L A T A A A V A A A K K Q Q Q A S - - - - - - - - -
 
AT1G28470.1     S A E T P I T T C P S C G H K L H H H Q D D Q V G S I K D L P S L P A G V K F D P S D K E I L M H L E A K V S S D K R K
Sb025585_Sorbi1    S H V N L I R T C P S C G H R A Q Y E Q V Q A A A T I Q D L P G L P A G V K F D P T D Q E L L E H L E G K A R P D A R K
 
AT1G28470.1     L H P L I D E F I P T L E G E N G I C Y T H P E K L P G V S K D G Q V R H F F H R P S K A Y T T G T R K R R K V S T D E
Sb025585_Sorbi1    L H P L I D E F I P T I E G E N G I C Y T H P E R L P G V G K D G L I R H F F H R P S K A Y T T G T R K R R K V H T D E
 
AT1G28470.1     E G H E T R W H K T G K T R P V L S Q S G E T G F K K I L V L Y T N Y G R Q K K P E K T N W V M H Q Y H L G S S E D E K
Sb025585_Sorbi1    Q G G E T R W H K T G K T R P V F T N G K L K G Y K K I L V L Y T N Y G K Q R K P E K T N W V M H Q Y H L G S D E E E K
 
AT1G28470.1     D G E P V L S K V F Y Q T Q P R Q C G S M E P K P K N L V N L - - - - - - - - - - - - - N R F S Y E N I Q A G F G Y E H
Sb025585_Sorbi1    D G E L V V S K V F Y Q T Q P R Q C G S G S A T A K D V V P L A A G L A T T D H H H H H H H H H H D D D D G G N G G S A
 
AT1G28470.1     G - - - - - - - - - - - G K S E E T T Q V I R E L V V R E G D G S C S F L - S F T C D A S K G K E S F M K N Q
Sb025585_Sorbi1    G I V D F Y S P A A L I G Y N Q A V A P T N R A A A A - - - - A S A H L M P N F E V H T T A G T A G F G P - -
 
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