fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036334 not found in 312aa AT4G28500.1 1st_not 0.534142640 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28470.1     MSWCDGSDDNYDLNLER-VSNTDHPSVQLKDQSQSCVTSRPDSKISAETPITTCPSCGHK
gm036334_Glyma1 MTWCNDSDE------ERGIDQLVAPAITPTSTNNTTVLTHDHHRKPTEIRTITCPSCGHN
                *:**:.**:      ** :.:   *::  .. .:: * :: . : .:*    *******:

AT1G28470.1     LHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSSDKRKLHPLIDEFIPTLEGE
gm036334_Glyma1 IEFQ--DQTG-INDLPGLPAGVKFDPNDQEILEHLEAKVFSDVPKLHPLIDEFIPTLEGE
                :..:  **.* *:***.*********.*:*** ****** **  ****************

AT1G28470.1     NGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTGKTRP
gm036334_Glyma1 NGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDKEGSETRWHKTGKTRP
                *******************:********************* **:** ************

AT1G28470.1     VLSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPVLSKVFYQTQP
gm036334_Glyma1 VFVGGAVKGFKKILVLYTNYGRQQKPEKTNWVMHQYHLGTSEEEKDGELVVSKIFYQTQP
                *:  .. .***************:***************:**:***** *:**:******

AT1G28470.1     RQCGSMEPKPKNLVNLNRFSYENIQAGFGY---------EHGGKS--EETTQVIRELVVR
gm036334_Glyma1 RQCGNNSIIKQDLYDEERLISNNASALMDYYNPSFINYDQLGGRSNRESSAQLIPNLAM-
                ****. .   ::* : :*:  :* .* :.*         : **:*  *.::*:* :*.: 

AT1G28470.1     EGDGSCSFLSFTCDASKGKESFMKNQ-
gm036334_Glyma1 QGDSS-SFIRLAMDATKA----MLDRK
                :**.* **: :: **:*.    * ::
BoxShade v3.31 C (beta, 970507) Output
AT1G28470.1     M S W C D G S D D N Y D L N L E R - V S N T D H P S V Q L K D Q S Q S C V T S R P D S K I S A E T P I T T C P S C G H K
gm036334_Glyma1    M T W C N D S D E - - - - - - E R G I D Q L V A P A I T P T S T N N T T V L T H D H H R K P T E I R T I T C P S C G H N
 
AT1G28470.1     L H H H Q D D Q V G S I K D L P S L P A G V K F D P S D K E I L M H L E A K V S S D K R K L H P L I D E F I P T L E G E
gm036334_Glyma1    I E F Q - - D Q T G - I N D L P G L P A G V K F D P N D Q E I L E H L E A K V F S D V P K L H P L I D E F I P T L E G E
 
AT1G28470.1     N G I C Y T H P E K L P G V S K D G Q V R H F F H R P S K A Y T T G T R K R R K V S T D E E G H E T R W H K T G K T R P
gm036334_Glyma1    N G I C Y T H P E K L P G V S K D G Q I R H F F H R P S K A Y T T G T R K R R K V H T D K E G S E T R W H K T G K T R P
 
AT1G28470.1     V L S Q S G E T G F K K I L V L Y T N Y G R Q K K P E K T N W V M H Q Y H L G S S E D E K D G E P V L S K V F Y Q T Q P
gm036334_Glyma1    V F V G G A V K G F K K I L V L Y T N Y G R Q Q K P E K T N W V M H Q Y H L G T S E E E K D G E L V V S K I F Y Q T Q P
 
AT1G28470.1     R Q C G S M E P K P K N L V N L N R F S Y E N I Q A G F G Y - - - - - - - - - E H G G K S - - E E T T Q V I R E L V V R
gm036334_Glyma1    R Q C G N N S I I K Q D L Y D E E R L I S N N A S A L M D Y Y N P S F I N Y D Q L G G R S N R E S S A Q L I P N L A M -
 
AT1G28470.1     E G D G S C S F L S F T C D A S K G K E S F M K N Q -
gm036334_Glyma1    Q G D S S - S F I R L A M D A T K A - - - - M L D R K
 
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