fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28520.1 ACALYRLELKLVDGKK at 389/486 in AT1G28520.1
ACALYRLELKLVDGKK at 389/486 in AT1G28520.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020183 not found in 491aa AT1G28520.2 1st_not 0.735051546 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G28520.1     MTGKRSKTNCRSASHKLFKDKAKNRVDDLQGMLLDLQFARKESRPTDVTLLEEQVNQMLR
pt020183_POPTR_ -MGKGSKINCKSASHKLFKDKAKNRVDDLQGMFLDLQFARKESRTVDVAVLEEQVHQMLR
                  ** ** **:*********************:***********..**::*****:****

AT1G28520.1     EWKSELNEPSPASSLQQGGTLGSFSSDICRLLQLCDEEDDATSKLAAPKPEPADQNLEAG
pt020183_POPTR_ EWKSELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSALAAPKLEPNDQSMQGG
                *******************:*****:*********:******* ***** ** **.::.*

AT1G28520.1     KAAVFQRGYNLVQGKSEHGLPLVDNCKD-----LSLAAGNNFDGTAPLEYHQQYDLQQEF
pt020183_POPTR_ DNVVFQEEYAVNHGQQEHAFPFVDQCKDSPSGVRSLAI-NNIEGAAQLDYH-QFDLPQSF
                . .***. * : :*:.**.:*:**:***      ***  **::*:* *:** *:** *.*

AT1G28520.1     EPNFNGGFNNCPSYGVVEGPIHISNFIPTICPPPSAFLGPKCALWDCPRPAQ-GFDWFQD
pt020183_POPTR_ EQNFYTSFNGT-DLGEEDGMHHVSSYLPSMCPPPSAFLGPKCALWDCPRPAQGGLEWCQD
                * **  .**.  . *  :*  *:*.::*::********************** *::* **

AT1G28520.1     YCSSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPECEGAATAKS
pt020183_POPTR_ YCSSFHHSLALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKAEGKDVGIPECEGAATAKS
                ****** :**:*******.**:******************** *****************

AT1G28520.1     PWNAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQIMVEF
pt020183_POPTR_ PWNAPELFDLSVLEGETLREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEF
                **********:***.*****************************.**********:* **

AT1G28520.1     GGLKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKTSKGKVSNDSVADL
pt020183_POPTR_ GGLKRSYYMDPQPLNNFEWHLYEYEINKCDACALYRLELKAVDGKKTAKGKIANESVADL
                **************::************************ ******:***::*:*****

AT1G28520.1     QKQMGRLTAEFPPENNTTNTTNNNKRCIKGRPKVSTKVATGNVQNTVEQ------ANDYG
pt020183_POPTR_ QKQMGRLTAEFPPD---------NKRAVKGRTKVNAKVGVGNVYSGSTQVAPTNEAYDYG
                *************:         ***.:***.**.:**..*** .   *      * ***

AT1G28520.1     VGEEF-NYLVGNLSDYYIP-----
pt020183_POPTR_ PGPHYDDYLVENLEGYYLTQYKKP
                 * .: :*** **..**:.
BoxShade v3.31 C (beta, 970507) Output
AT1G28520.1     M T G K R S K T N C R S A S H K L F K D K A K N R V D D L Q G M L L D L Q F A R K E S R P T D V T L L E E Q V N Q M L R
pt020183_POPTR_    - M G K G S K I N C K S A S H K L F K D K A K N R V D D L Q G M F L D L Q F A R K E S R T V D V A V L E E Q V H Q M L R
 
AT1G28520.1     E W K S E L N E P S P A S S L Q Q G G T L G S F S S D I C R L L Q L C D E E D D A T S K L A A P K P E P A D Q N L E A G
pt020183_POPTR_    E W K S E L N E P S P A S S L Q Q G G S L G S F S T D I C R L L Q L C E E E D D A T S A L A A P K L E P N D Q S M Q G G
 
AT1G28520.1     K A A V F Q R G Y N L V Q G K S E H G L P L V D N C K D - - - - - L S L A A G N N F D G T A P L E Y H Q Q Y D L Q Q E F
pt020183_POPTR_    D N V V F Q E E Y A V N H G Q Q E H A F P F V D Q C K D S P S G V R S L A I - N N I E G A A Q L D Y H - Q F D L P Q S F
 
AT1G28520.1     E P N F N G G F N N C P S Y G V V E G P I H I S N F I P T I C P P P S A F L G P K C A L W D C P R P A Q - G F D W F Q D
pt020183_POPTR_    E Q N F Y T S F N G T - D L G E E D G M H H V S S Y L P S M C P P P S A F L G P K C A L W D C P R P A Q G G L E W C Q D
 
AT1G28520.1     Y C S S F H A A L A F N E G P P G M N P V V R P G G I G L K D G L L F A A L S A K A G G K D V G I P E C E G A A T A K S
pt020183_POPTR_    Y C S S F H H S L A L N E G P P G M S P V L R P G G I G L K D G L L F A A L S A K A E G K D V G I P E C E G A A T A K S
 
AT1G28520.1     P W N A P E L F D L T V L E S E T L R E W L F F D K P R R A F E S G N R K Q R S L P D Y N G R G W H E S R K Q I M V E F
pt020183_POPTR_    P W N A P E L F D L S V L E G E T L R E W L F F D K P R R A F E S G N R K Q R S L P D Y T G R G W H E S R K Q V M N E F
 
AT1G28520.1     G G L K R S Y Y M D P Q P L H H F E W H L Y E Y E I N K C D A C A L Y R L E L K L V D G K K T S K G K V S N D S V A D L
pt020183_POPTR_    G G L K R S Y Y M D P Q P L N N F E W H L Y E Y E I N K C D A C A L Y R L E L K A V D G K K T A K G K I A N E S V A D L
 
AT1G28520.1     Q K Q M G R L T A E F P P E N N T T N T T N N N K R C I K G R P K V S T K V A T G N V Q N T V E Q - - - - - - A N D Y G
pt020183_POPTR_    Q K Q M G R L T A E F P P D - - - - - - - - - N K R A V K G R T K V N A K V G V G N V Y S G S T Q V A P T N E A Y D Y G
 
AT1G28520.1     V G E E F - N Y L V G N L S D Y Y I P - - - - -
pt020183_POPTR_    P G P H Y D D Y L V E N L E G Y Y L T Q Y K K P
 
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