fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G28520.1 ACALYRLELKLVDGKK at 389/486 in AT1G28520.1
ACALYRLELKLVDGKK at 389/486 in AT1G28520.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024818 not found in 489aa AT1G28520.2 not_not 0.715463917 III
Pt012599 not found in 449aa AT1G28520.2 not_not 0.512371134 III
Pt014162 LCALYRLELKLANGKR in 385/438 AT1G28520.2 not_not 0.488659793 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G28520.1     MTGKRSKTNCRSASHKLFKDKAKNRVDDLQGMLLDLQFARKESRPTDVTLLEEQVNQMLR
pt014162_POPTR_ -MQKGKKSKCTSVSHHLLMDNAKTRLNDLHERFSNLQAARKEGWNSDVAVLEEQVYQGLR
pt012599_POPTR_ -MQKGGKSKCASTSHHLLMDNAKNRLNDLEERFFNIQTARKEGRNNDVALLEEQVCQSLR
pt024818_POPTR_ -MGKGSKINCKSASHKLFKDKAKNRVDDLQGMFLDLQFARKESRTVDVAVLEEQVHQMLR
                   *  * :* *.**:*: *:**.*::**.  : ::* ****.   **::***** * **

AT1G28520.1     EWKSELNEPSPASSLQQGGTLGSFSSDICRLLQLCDEEDDATSKLAAP-------KPEPA
pt014162_POPTR_ EWKAELDVPSPANSLLD-ISLGSFSDDIGRLLQLYEEEDDATSPLTMQSVLKPEMQPEPN
pt012599_POPTR_ EWKAELDVPSPANSLLD-ISLGSFSEDIGRLLQLYEEEDDATSPLTMQSVLKPETQPEPN
pt024818_POPTR_ EWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSALAAP-------KPEPN
                ***:**: ****.** :  :***** ** ***** :******* *:         :*** 

AT1G28520.1     DQNLEAGKAAVFQRGYNLVQGKSEHGLPLVDNCKD----LSLAAGNNFDGTAPLEYHQQY
pt014162_POPTR_ FQNLNPGNLTTFQ---------HGLGFQGFHQPNSSASGLQNVVVSAPDITTLLDCQ-QF
pt012599_POPTR_ FQNLNLGNLTTFQDEYLVNSHSQELGFQGFHQPNGS-SGLQNVAVSDPDITTLLDCH-QF
pt024818_POPTR_ DQSLQVGNNVVFQEGYGVNHDQQEHVFPFVDQCKDSPSGVRSMVINNMEGVAQLEYH-HF
                 *.*: *: ..**             :  ..: :.    :   . .  : .: *: : ::

AT1G28520.1     DLQQEFEPNFNGGFNNCPSYGVVEGPIH-ISNFIPTICPPPSAFLGPKCALWDCPRPAQ-
pt014162_POPTR_ TLDEEFDPGLFGGTND-----IEECGKNAESNNLQYISPPPSAFMGPKCALWDCTRPAQ-
pt012599_POPTR_ TLDEEFDPGHFVGTND-----TKECGINSESNNLQYISPPPSAFMGPKCALWDCTRPAQ-
pt024818_POPTR_ DLPQNSEQNFYTGFND---MDLGEDATHLVSSYLPSMCPPPSAFLGPKCALWDCPRPAQG
                 * :: : .   * *:       *   :  *. :  :.******:*********.**** 

AT1G28520.1     GFDWFQDYCSSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPECE
pt014162_POPTR_ VAEWLEDYCSSFHATLALNEGPPGMAPVLRPRGINLKDNLLFDALIAKMQGKNVGIPQCE
pt012599_POPTR_ GAEWCEDYCSSFHATLALNEGPPGMTPVLRPRGINLKDNLLFDALTAKMQGKNVGIPQCE
pt024818_POPTR_ GLDWYQDYCSSFHHAVALNEGPPGLSPILRPGGIGLKDGLLFSSLSAKVEGKDVGIPECE
                  :* :******* ::*:******: *::** **.***.*** :* **  **:****:**

AT1G28520.1     GAATAKSPWNAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESR
pt014162_POPTR_ GAAVMKSPWNAAELFDLSLLDGETIREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESR
pt012599_POPTR_ GAAVMKSPWNAAELFDLSLLEGETIREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESR
pt024818_POPTR_ GAATAKSPWNAPELFDLSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESR
                ***. ******.*****::*..**:*************:************.********

AT1G28520.1     KQIMVEFGGLKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKTSKGKVS
pt014162_POPTR_ KQVMKELGGQKKSYYMDPQPPGCHEWHLFEYEINKCDLCALYRLELKLANGKRSPKGKVS
pt012599_POPTR_ KQVMKELGGKKKSYYMDPQPPGCHEWHLYEYEINNCDACALYRLEFKLADGKKTPKGKVS
pt024818_POPTR_ KQVMNEFGGLKRSYYMDPQPLNNFEWHLYEYEINNCDACALYRLELKAVDGKKSAKGKLA
                **:* *:** *:********   .****:*****:** *******:* .:**::.***::

AT1G28520.1     NDSVADLQKQMGRLTAEFPPENNTTNTTNNNKRCIKGRPKVSTKVATGNVQNTVEQAN--
pt014162_POPTR_ KDPLADLQKKMGRLTAVVT---------ADNGPPLKGKTKADRE----------------
pt012599_POPTR_ KDSLVDLQKKMGRLTAVVT---------ADNSPSDKGKTNTSGT----------------
pt024818_POPTR_ NESVVDLQKQMGRLTAEFP---------SDHKRAVKGRTKVNAKAGVRNVYSGATQAAPT
                ::.:.****:****** ..          ::    **:.:..                  

AT1G28520.1     ----DYGVGEEFNYLVGNLSDYYIP-----
pt014162_POPTR_ ----N-------------------------
pt012599_POPTR_ ----GHGP----------------------
pt024818_POPTR_ NEAYDYGPGPHYDYLVENLGDYYLTQFKKP
                    .
BoxShade v3.31 C (beta, 970507) Output
AT1G28520.1     M T G K R S K T N C R S A S H K L F K D K A K N R V D D L Q G M L L D L Q F A R K E S R P T D V T L L E E Q V N Q M L R
pt014162_POPTR_    - M Q K G K K S K C T S V S H H L L M D N A K T R L N D L H E R F S N L Q A A R K E G W N S D V A V L E E Q V Y Q G L R
pt012599_POPTR_    - M Q K G G K S K C A S T S H H L L M D N A K N R L N D L E E R F F N I Q T A R K E G R N N D V A L L E E Q V C Q S L R
pt024818_POPTR_    - M G K G S K I N C K S A S H K L F K D K A K N R V D D L Q G M F L D L Q F A R K E S R T V D V A V L E E Q V H Q M L R
 
AT1G28520.1     E W K S E L N E P S P A S S L Q Q G G T L G S F S S D I C R L L Q L C D E E D D A T S K L A A P - - - - - - - K P E P A
pt014162_POPTR_    E W K A E L D V P S P A N S L L D - I S L G S F S D D I G R L L Q L Y E E E D D A T S P L T M Q S V L K P E M Q P E P N
pt012599_POPTR_    E W K A E L D V P S P A N S L L D - I S L G S F S E D I G R L L Q L Y E E E D D A T S P L T M Q S V L K P E T Q P E P N
pt024818_POPTR_    E W K A E L N E P S P A S S L Q Q G G S L G S F S T D I C R L L Q L C E E E D D A T S A L A A P - - - - - - - K P E P N
 
AT1G28520.1     D Q N L E A G K A A V F Q R G Y N L V Q G K S E H G L P L V D N C K D - - - - L S L A A G N N F D G T A P L E Y H Q Q Y
pt014162_POPTR_    F Q N L N P G N L T T F Q - - - - - - - - - H G L G F Q G F H Q P N S S A S G L Q N V V V S A P D I T T L L D C Q - Q F
pt012599_POPTR_    F Q N L N L G N L T T F Q D E Y L V N S H S Q E L G F Q G F H Q P N G S - S G L Q N V A V S D P D I T T L L D C H - Q F
pt024818_POPTR_    D Q S L Q V G N N V V F Q E G Y G V N H D Q Q E H V F P F V D Q C K D S P S G V R S M V I N N M E G V A Q L E Y H - H F
 
AT1G28520.1     D L Q Q E F E P N F N G G F N N C P S Y G V V E G P I H - I S N F I P T I C P P P S A F L G P K C A L W D C P R P A Q -
pt014162_POPTR_    T L D E E F D P G L F G G T N D - - - - - I E E C G K N A E S N N L Q Y I S P P P S A F M G P K C A L W D C T R P A Q -
pt012599_POPTR_    T L D E E F D P G H F V G T N D - - - - - T K E C G I N S E S N N L Q Y I S P P P S A F M G P K C A L W D C T R P A Q -
pt024818_POPTR_    D L P Q N S E Q N F Y T G F N D - - - M D L G E D A T H L V S S Y L P S M C P P P S A F L G P K C A L W D C P R P A Q G
 
AT1G28520.1     G F D W F Q D Y C S S F H A A L A F N E G P P G M N P V V R P G G I G L K D G L L F A A L S A K A G G K D V G I P E C E
pt014162_POPTR_    V A E W L E D Y C S S F H A T L A L N E G P P G M A P V L R P R G I N L K D N L L F D A L I A K M Q G K N V G I P Q C E
pt012599_POPTR_    G A E W C E D Y C S S F H A T L A L N E G P P G M T P V L R P R G I N L K D N L L F D A L T A K M Q G K N V G I P Q C E
pt024818_POPTR_    G L D W Y Q D Y C S S F H H A V A L N E G P P G L S P I L R P G G I G L K D G L L F S S L S A K V E G K D V G I P E C E
 
AT1G28520.1     G A A T A K S P W N A P E L F D L T V L E S E T L R E W L F F D K P R R A F E S G N R K Q R S L P D Y N G R G W H E S R
pt014162_POPTR_    G A A V M K S P W N A A E L F D L S L L D G E T I R E W L F F D K P R R A F D S G N R K Q R S L P D Y N G R G W H E S R
pt012599_POPTR_    G A A V M K S P W N A A E L F D L S L L E G E T I R E W L F F D K P R R A F D S G N R K Q R S L P D Y S G R G W H E S R
pt024818_POPTR_    G A A T A K S P W N A P E L F D L S V L K G E T I R E W L F F D K P R R A F E S G N R K Q R S L P D Y T G R G W H E S R
 
AT1G28520.1     K Q I M V E F G G L K R S Y Y M D P Q P L H H F E W H L Y E Y E I N K C D A C A L Y R L E L K L V D G K K T S K G K V S
pt014162_POPTR_    K Q V M K E L G G Q K K S Y Y M D P Q P P G C H E W H L F E Y E I N K C D L C A L Y R L E L K L A N G K R S P K G K V S
pt012599_POPTR_    K Q V M K E L G G K K K S Y Y M D P Q P P G C H E W H L Y E Y E I N N C D A C A L Y R L E F K L A D G K K T P K G K V S
pt024818_POPTR_    K Q V M N E F G G L K R S Y Y M D P Q P L N N F E W H L Y E Y E I N N C D A C A L Y R L E L K A V D G K K S A K G K L A
 
AT1G28520.1     N D S V A D L Q K Q M G R L T A E F P P E N N T T N T T N N N K R C I K G R P K V S T K V A T G N V Q N T V E Q A N - -
pt014162_POPTR_    K D P L A D L Q K K M G R L T A V V T - - - - - - - - - A D N G P P L K G K T K A D R E - - - - - - - - - - - - - - - -
pt012599_POPTR_    K D S L V D L Q K K M G R L T A V V T - - - - - - - - - A D N S P S D K G K T N T S G T - - - - - - - - - - - - - - - -
pt024818_POPTR_    N E S V V D L Q K Q M G R L T A E F P - - - - - - - - - S D H K R A V K G R T K V N A K A G V R N V Y S G A T Q A A P T
 
AT1G28520.1     - - - - D Y G V G E E F N Y L V G N L S D Y Y I P - - - - -
pt014162_POPTR_    - - - - N - - - - - - - - - - - - - - - - - - - - - - - - -
pt012599_POPTR_    - - - - G H G P - - - - - - - - - - - - - - - - - - - - - -
pt024818_POPTR_    N E A Y D Y G P G P H Y D Y L V E N L G D Y Y L T Q F K K P
 
0