fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G29160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012581 not found in 165aa AT1G29160.1 1st_1st 0.492492492 Ia
Pt019779 not found in 159aa AT1G29160.1 1st_1st 0.564564564 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G29160.1     ----MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEK
gm012581_Glyma0 MAEAQSGQASEGIKLFGTTITLHG-------RERKEDRNDSE--------DGTEEI---K
pt019779_POPTR_ ----MASQE-EGIKLFGATITLHD------KQEGNKEDPNKE--------NPTTD----K
                     : *  :****** ***::        :* :::  : *        . : :    *

AT1G29160.1     RPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKP
gm012581_Glyma0 RPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKVKP
pt019779_POPTR_ RPEKVIPCPRCKSMETKFCYFNNYNVNQPRYFCKGCQRYWTAGGALRNVPVGAGRRKTKP
                **:*:*************************:************************** **

AT1G29160.1     PGRVG--GFAE-LLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRC-YTDG
gm012581_Glyma0 QF-----GQEE----------------RLALDEWHVAAVAHGDFRQLFPSKRRRM-SSAQ
pt019779_POPTR_ PGRVGLDGYSEGCLYDGSGGVHRFELDGMVLEEWHLAT-THGSSRHVFPVKRRRSGGSGG
                       *  *                 : ::**: *: :**. *: ** ** *   :  

AT1G29160.1     QSC----------------------
gm012581_Glyma0 HESQRKFVIIHEITEHPNQIETKEA
pt019779_POPTR_ HTC----------------------
                : .
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1     - - - - M A T Q D S Q G I K L F G K T I T F N A N I T Q T I K K E E Q Q Q Q Q Q P E L Q A T T A V R S P S S D L T A E K
gm012581_Glyma0    M A E A Q S G Q A S E G I K L F G T T I T L H G - - - - - - - R E R K E D R N D S E - - - - - - - - D G T E E I - - - K
pt019779_POPTR_    - - - - M A S Q E - E G I K L F G A T I T L H D - - - - - - K Q E G N K E D P N K E - - - - - - - - N P T T D - - - - K
 
AT1G29160.1     R P D K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K S K P
gm012581_Glyma0    R P D K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K V K P
pt019779_POPTR_    R P E K V I P C P R C K S M E T K F C Y F N N Y N V N Q P R Y F C K G C Q R Y W T A G G A L R N V P V G A G R R K T K P
 
AT1G29160.1     P G R V G - - G F A E - L L G A A T G A V D Q V E L D A L L V E E W R A A T A S H G G F R H D F P V K R L R C - Y T D G
gm012581_Glyma0    Q F - - - - - G Q E E - - - - - - - - - - - - - - - - R L A L D E W H V A A V A H G D F R Q L F P S K R R R M - S S A Q
pt019779_POPTR_    P G R V G L D G Y S E G C L Y D G S G G V H R F E L D G M V L E E W H L A T - T H G S S R H V F P V K R R R S G G S G G
 
AT1G29160.1     Q S C - - - - - - - - - - - - - - - - - - - - - -
gm012581_Glyma0    H E S Q R K F V I I H E I T E H P N Q I E T K E A
pt019779_POPTR_    H T C - - - - - - - - - - - - - - - - - - - - - -
 
0