Input
| Putative repression domain
|
|
AT1G29160.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm012581 |
not found in 165aa |
AT1G29160.1 |
1st_1st |
0.492492492 |
Ia |
Pt019779 |
not found in 159aa |
AT1G29160.1 |
1st_1st |
0.564564564 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G29160.1 ----MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEK
pt019779_POPTR_ ----MASQE-EGIKLFGATITLHD------KQEGNKEDPNKE--------NPTTD----K
gm012581_Glyma0 MAEAQSGQASEGIKLFGTTITLHG-------RERKEDRNDSE--------DGTEEI---K
: * :****** ***:: :* ::: : * . : : *
AT1G29160.1 RPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKP
pt019779_POPTR_ RPEKVIPCPRCKSMETKFCYFNNYNVNQPRYFCKGCQRYWTAGGALRNVPVGAGRRKTKP
gm012581_Glyma0 RPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKVKP
**:*:*************************:************************** **
AT1G29160.1 PGRVG--GFAE-LLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRC-YTDG
pt019779_POPTR_ PGRVGLDGYSEGCLYDGSGGVHRFELDGMVLEEWHLAT-THGSSRHVFPVKRRRSGGSGG
gm012581_Glyma0 QF-----GQEE----------------RLALDEWHVAAVAHGDFRQLFPSKRRRM-SSAQ
* * : ::**: *: :**. *: ** ** * :
AT1G29160.1 QSC----------------------
pt019779_POPTR_ HTC----------------------
gm012581_Glyma0 HESQRKFVIIHEITEHPNQIETKEA
: .
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1 |
- |
- |
- |
- |
M |
A |
T |
Q |
D |
S |
Q |
G |
I |
K |
L |
F |
G |
K |
T |
I |
T |
F |
N |
A |
N |
I |
T |
Q |
T |
I |
K |
K |
E |
E |
Q |
Q |
Q |
Q |
Q |
Q |
P |
E |
L |
Q |
A |
T |
T |
A |
V |
R |
S |
P |
S |
S |
D |
L |
T |
A |
E |
K |
pt019779_POPTR_ |
- |
- |
- |
- |
M |
A |
S |
Q |
E |
- |
E |
G |
I |
K |
L |
F |
G |
A |
T |
I |
T |
L |
H |
D |
- |
- |
- |
- |
- |
- |
K |
Q |
E |
G |
N |
K |
E |
D |
P |
N |
K |
E |
- |
- |
- |
- |
- |
- |
- |
- |
N |
P |
T |
T |
D |
- |
- |
- |
- |
K |
gm012581_Glyma0 |
M |
A |
E |
A |
Q |
S |
G |
Q |
A |
S |
E |
G |
I |
K |
L |
F |
G |
T |
T |
I |
T |
L |
H |
G |
- |
- |
- |
- |
- |
- |
- |
R |
E |
R |
K |
E |
D |
R |
N |
D |
S |
E |
- |
- |
- |
- |
- |
- |
- |
- |
D |
G |
T |
E |
E |
I |
- |
- |
- |
K |
|
AT1G29160.1 |
R |
P |
D |
K |
I |
I |
P |
C |
P |
R |
C |
K |
S |
M |
E |
T |
K |
F |
C |
Y |
F |
N |
N |
Y |
N |
V |
N |
Q |
P |
R |
H |
F |
C |
K |
G |
C |
Q |
R |
Y |
W |
T |
A |
G |
G |
A |
L |
R |
N |
V |
P |
V |
G |
A |
G |
R |
R |
K |
S |
K |
P |
pt019779_POPTR_ |
R |
P |
E |
K |
V |
I |
P |
C |
P |
R |
C |
K |
S |
M |
E |
T |
K |
F |
C |
Y |
F |
N |
N |
Y |
N |
V |
N |
Q |
P |
R |
Y |
F |
C |
K |
G |
C |
Q |
R |
Y |
W |
T |
A |
G |
G |
A |
L |
R |
N |
V |
P |
V |
G |
A |
G |
R |
R |
K |
T |
K |
P |
gm012581_Glyma0 |
R |
P |
D |
K |
I |
I |
P |
C |
P |
R |
C |
K |
S |
M |
E |
T |
K |
F |
C |
Y |
F |
N |
N |
Y |
N |
V |
N |
Q |
P |
R |
H |
F |
C |
K |
G |
C |
Q |
R |
Y |
W |
T |
A |
G |
G |
A |
L |
R |
N |
V |
P |
V |
G |
A |
G |
R |
R |
K |
V |
K |
P |
|
AT1G29160.1 |
P |
G |
R |
V |
G |
- |
- |
G |
F |
A |
E |
- |
L |
L |
G |
A |
A |
T |
G |
A |
V |
D |
Q |
V |
E |
L |
D |
A |
L |
L |
V |
E |
E |
W |
R |
A |
A |
T |
A |
S |
H |
G |
G |
F |
R |
H |
D |
F |
P |
V |
K |
R |
L |
R |
C |
- |
Y |
T |
D |
G |
pt019779_POPTR_ |
P |
G |
R |
V |
G |
L |
D |
G |
Y |
S |
E |
G |
C |
L |
Y |
D |
G |
S |
G |
G |
V |
H |
R |
F |
E |
L |
D |
G |
M |
V |
L |
E |
E |
W |
H |
L |
A |
T |
- |
T |
H |
G |
S |
S |
R |
H |
V |
F |
P |
V |
K |
R |
R |
R |
S |
G |
G |
S |
G |
G |
gm012581_Glyma0 |
Q |
F |
- |
- |
- |
- |
- |
G |
Q |
E |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
L |
A |
L |
D |
E |
W |
H |
V |
A |
A |
V |
A |
H |
G |
D |
F |
R |
Q |
L |
F |
P |
S |
K |
R |
R |
R |
M |
- |
S |
S |
A |
Q |
|
AT1G29160.1 |
Q |
S |
C |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt019779_POPTR_ |
H |
T |
C |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
gm012581_Glyma0 |
H |
E |
S |
Q |
R |
K |
F |
V |
I |
I |
H |
E |
I |
T |
E |
H |
P |
N |
Q |
I |
E |
T |
K |
E |
A |
|
|