fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G29160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm022058 not found in 56aa AT1G29160.1 1st_1st 0.363363363 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G29160.1     MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDK
Sm022058_Selmo1 ------------------------------------------------------------
                                                                            

AT1G29160.1     IIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV
Sm022058_Selmo1 ------------------------------------------------------------
                                                                            

AT1G29160.1     GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRCYTDGQSC
Sm022058_Selmo1 -------------------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1     M A T Q D S Q G I K L F G K T I T F N A N I T Q T I K K E E Q Q Q Q Q Q P E L Q A T T A V R S P S S D L T A E K R P D K
Sm022058_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G29160.1     I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K S K P P G R V
Sm022058_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G29160.1     G G F A E L L G A A T G A V D Q V E L D A L L V E E W R A A T A S H G G F R H D F P V K R L R C Y T D G Q S C
Sm022058_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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