fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G29160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024374 not found in 161aa AT1G29160.1 not_1st 0.561561561 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G29160.1     MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDK
pt024374_POPTR_ MASQE-EGIKLFGATITLHDG--QVISKEDQNKENP----------------TIDKRPEK
                **:*: :****** ***:: .  *.*.**:*::::                 * :***:*

AT1G29160.1     IIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGR-
pt024374_POPTR_ IIQCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGRG
                ** **************************************************:***** 

AT1G29160.1     -VGGFAE--LLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRC-YTDGQSC
pt024374_POPTR_ GPGGYSEECLFDGSGGVIHQFELDGVVLEELHLAT-THGGFRQVFPVKRRRSGGSGGQNC
                  **::*  *:..: *.:.*.***.:::** : ** :*****: ***** *.  :.**.*

AT1G29160.1     -
pt024374_POPTR_ W
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1     M A T Q D S Q G I K L F G K T I T F N A N I T Q T I K K E E Q Q Q Q Q Q P E L Q A T T A V R S P S S D L T A E K R P D K
pt024374_POPTR_    M A S Q E - E G I K L F G A T I T L H D G - - Q V I S K E D Q N K E N P - - - - - - - - - - - - - - - - T I D K R P E K
 
AT1G29160.1     I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K S K P P G R -
pt024374_POPTR_    I I Q C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K T K P P G R G
 
AT1G29160.1     - V G G F A E - - L L G A A T G A V D Q V E L D A L L V E E W R A A T A S H G G F R H D F P V K R L R C - Y T D G Q S C
pt024374_POPTR_    G P G G Y S E E C L F D G S G G V I H Q F E L D G V V L E E L H L A T - T H G G F R Q V F P V K R R R S G G S G G Q N C
 
AT1G29160.1     -
pt024374_POPTR_    W
 
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