fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G29160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019779 not found in 159aa AT1G29160.1 1st_1st 0.564564564 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G29160.1     MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDK
pt019779_POPTR_ MASQE-EGIKLFGATITLHD------KQEGNKEDPNKE--------NPTTD----KRPEK
                **:*: :****** ***::       *:* :::: : *        .*::*    ***:*

AT1G29160.1     IIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV
pt019779_POPTR_ VIPCPRCKSMETKFCYFNNYNVNQPRYFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGRV
                :*************************:**************************:******

AT1G29160.1     G--GFAE-LLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRC-YTDGQSC
pt019779_POPTR_ GLDGYSEGCLYDGSGGVHRFELDGMVLEEWHLAT-THGSSRHVFPVKRRRSGGSGGHTC
                *  *::*  *  .:*.*.:.***.:::***: ** :**. ** ***** *.  :.*::*
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1     M A T Q D S Q G I K L F G K T I T F N A N I T Q T I K K E E Q Q Q Q Q Q P E L Q A T T A V R S P S S D L T A E K R P D K
pt019779_POPTR_    M A S Q E - E G I K L F G A T I T L H D - - - - - - K Q E G N K E D P N K E - - - - - - - - N P T T D - - - - K R P E K
 
AT1G29160.1     I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K S K P P G R V
pt019779_POPTR_    V I P C P R C K S M E T K F C Y F N N Y N V N Q P R Y F C K G C Q R Y W T A G G A L R N V P V G A G R R K T K P P G R V
 
AT1G29160.1     G - - G F A E - L L G A A T G A V D Q V E L D A L L V E E W R A A T A S H G G F R H D F P V K R L R C - Y T D G Q S C
pt019779_POPTR_    G L D G Y S E G C L Y D G S G G V H R F E L D G M V L E E W H L A T - T H G S S R H V F P V K R R R S G G S G G H T C
 
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