fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G29160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020972 not found in 701aa AT5G39660.2 1st_not 0.402402402 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G29160.1     ----------------------------------------------MATQDSQG------
Sb020972_Sorbi1 TYLRRLDLVLPSVCRLASCFFLLGLQQQQQAKPGACVCLDRSEKKMMA--ECQGGGGGDF
                                                              **  :.**      

AT1G29160.1     -IKLFGKTI----TFNANITQ----TIKKEEQQQQQ------------------QPE-LQ
Sb020972_Sorbi1 LIKLFGKTIPVPESGDAKDLQQSSSSSSSTEQDHQDAHALDQENPHPDSSDPSPQPEVVD
                 ********    : :*:  *    : .. **::*:                  *** ::

AT1G29160.1     ATTAVRSP------------SSDLTAE----KRPDKIIPCPRCKSMETKFCYFNNYNVNQ
Sb020972_Sorbi1 AEDPKSSPETTHQKPGQGNGSGDAASQREKLKKPDKVLPCPRCNSMDTKFCYFNNYNVNQ
                *  .  **            *.* :::    *:***::*****:**:*************

AT1G29160.1     PRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRVGGFAELLGAATGA-----------
Sb020972_Sorbi1 PRHFCKNCQRYWTAGGAMRNVPVGAGRRKNKNAVAASHFLHRVGAACGGGGDTLKTTNGT
                ******.**********:***********.* .  .. * . :*** *.           

AT1G29160.1     ------------------VDQVEL-----------------------------------D
Sb020972_Sorbi1 VLSFGGHGGGCVPPGPACLDLVEQLSHHLAAPVIRNAGNNPGPCSEGSSNCRDDNKTIND
                                  :* **                                    *

AT1G29160.1     ALLVEEWRAATASHGGFRH-----------------------------------------
Sb020972_Sorbi1 RSCVDEAAAANGDDGSVQHPASMNNGGATVWPPPYSCAPSPAAYFSSGIAIPIYPAAPGY
                   *:*  **....*..:*                                         

AT1G29160.1     -----------DFPVKR------------LRCYT--------------------------
Sb020972_Sorbi1 WGCMVPGAWSLPWPVQQPPSSQSQGPAAGLSSSTSPTTTSAPSVSSSGAADSHTLGLGKH
                            :**::            * . *                          

AT1G29160.1     --------DGQSC-----------------------------------------------
Sb020972_Sorbi1 PRDREEGDDGRNAKVWAPKTIRIDDVDEVARSSIWSLIGIKGDKAKQQDDDAAGGHKQKQ
                        **:..                                               

AT1G29160.1     -------------------------------------------
Sb020972_Sorbi1 LVGMVFEPKREATKKPAAMMTSSPLLHANPVALTRSVAFQEGS
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A T Q D S Q G - - - - - -
Sb020972_Sorbi1    T Y L R R L D L V L P S V C R L A S C F F L L G L Q Q Q Q Q A K P G A C V C L D R S E K K M M A - - E C Q G G G G G D F
 
AT1G29160.1     - I K L F G K T I - - - - T F N A N I T Q - - - - T I K K E E Q Q Q Q Q - - - - - - - - - - - - - - - - - - Q P E - L Q
Sb020972_Sorbi1    L I K L F G K T I P V P E S G D A K D L Q Q S S S S S S S T E Q D H Q D A H A L D Q E N P H P D S S D P S P Q P E V V D
 
AT1G29160.1     A T T A V R S P - - - - - - - - - - - - S S D L T A E - - - - K R P D K I I P C P R C K S M E T K F C Y F N N Y N V N Q
Sb020972_Sorbi1    A E D P K S S P E T T H Q K P G Q G N G S G D A A S Q R E K L K K P D K V L P C P R C N S M D T K F C Y F N N Y N V N Q
 
AT1G29160.1     P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K S K P P G R V G G F A E L L G A A T G A - - - - - - - - - - -
Sb020972_Sorbi1    P R H F C K N C Q R Y W T A G G A M R N V P V G A G R R K N K N A V A A S H F L H R V G A A C G G G G D T L K T T N G T
 
AT1G29160.1     - - - - - - - - - - - - - - - - - - V D Q V E L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D
Sb020972_Sorbi1    V L S F G G H G G G C V P P G P A C L D L V E Q L S H H L A A P V I R N A G N N P G P C S E G S S N C R D D N K T I N D
 
AT1G29160.1     A L L V E E W R A A T A S H G G F R H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020972_Sorbi1    R S C V D E A A A A N G D D G S V Q H P A S M N N G G A T V W P P P Y S C A P S P A A Y F S S G I A I P I Y P A A P G Y
 
AT1G29160.1     - - - - - - - - - - - D F P V K R - - - - - - - - - - - - L R C Y T - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020972_Sorbi1    W G C M V P G A W S L P W P V Q Q P P S S Q S Q G P A A G L S S S T S P T T T S A P S V S S S G A A D S H T L G L G K H
 
AT1G29160.1     - - - - - - - - D G Q S C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020972_Sorbi1    P R D R E E G D D G R N A K V W A P K T I R I D D V D E V A R S S I W S L I G I K G D K A K Q Q D D D A A G G H K Q K Q
 
AT1G29160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020972_Sorbi1    L V G M V F E P K R E A T K K P A A M M T S S P L L H A N P V A L T R S V A F Q E G S
 
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