fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G29160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036926 not found in 153aa AT1G29160.1 not_1st 0.411411411 II
Gm041570 not found in 153aa AT1G29160.1 not_1st 0.405405405 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G29160.1     MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDK
gm036926_Glyma1 -MAEESQGIKLFGAMITLNRG---EVNKGEKGSEYE----------------RVEKRAEK
gm041570_Glyma1 -MGEESQGIKLFGALITLKGG---EVKKGEKGSEYE----------------RVEKRAEK
                   ::********  **:: .    ::* *: .: :                 .***.:*

AT1G29160.1     IIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV
gm036926_Glyma1 IIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAVGAGRRKVKSPCHG
gm041570_Glyma1 IIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAVGAGRRKAKSPCHG
                ******************************.**************.******* *.* : 

AT1G29160.1     GGFAELLGAA-----------TGAVDQVELDALLVEEWRAATAS-HGGFRHDFPVKRLRC
gm036926_Glyma1 AGVYERTRCHAQHWFPADFSGQAAED------------HLSSAS-----RSIKSSTKTQL
gm041570_Glyma1 AGDFMDGRAY-----------ETSEDENRFE---MNQGHVAMPNTH--FRQIFQAKRQRI
                .*      .              : *            : : ..     *     .: : 

AT1G29160.1     YTDGQSC---
gm036926_Glyma1 GIIMKQEEKT
gm041570_Glyma1 TSGAQHQGQ-
                    :
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1     M A T Q D S Q G I K L F G K T I T F N A N I T Q T I K K E E Q Q Q Q Q Q P E L Q A T T A V R S P S S D L T A E K R P D K
gm036926_Glyma1    - M A E E S Q G I K L F G A M I T L N R G - - - E V N K G E K G S E Y E - - - - - - - - - - - - - - - - R V E K R A E K
gm041570_Glyma1    - M G E E S Q G I K L F G A L I T L K G G - - - E V K K G E K G S E Y E - - - - - - - - - - - - - - - - R V E K R A E K
 
AT1G29160.1     I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K S K P P G R V
gm036926_Glyma1    I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K S C Q R Y W T A G G A L R N V A V G A G R R K V K S P C H G
gm041570_Glyma1    I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K S C Q R Y W T A G G A L R N V A V G A G R R K A K S P C H G
 
AT1G29160.1     G G F A E L L G A A - - - - - - - - - - - T G A V D Q V E L D A L L V E E W R A A T A S - H G G F R H D F P V K R L R C
gm036926_Glyma1    A G V Y E R T R C H A Q H W F P A D F S G Q A A E D - - - - - - - - - - - - H L S S A S - - - - - R S I K S S T K T Q L
gm041570_Glyma1    A G D F M D G R A Y - - - - - - - - - - - E T S E D E N R F E - - - M N Q G H V A M P N T H - - F R Q I F Q A K R Q R I
 
AT1G29160.1     Y T D G Q S C - - -
gm036926_Glyma1    G I I M K Q E E K T
gm041570_Glyma1    T S G A Q H Q G Q -
 
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