fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G29160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012581 not found in 165aa AT1G29160.1 1st_1st 0.492492492 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G29160.1     ----MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAE-
gm012581_Glyma0 MAEAQSGQASEGIKLFGTTITLHG-------RERKED------------RNDSEDGTEEI
                     : * *:******.***::.       :*.:::            *. *.* * * 

AT1G29160.1     KRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSK
gm012581_Glyma0 KRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKVK
                ********************************************************** *

AT1G29160.1     PPGRVGGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRCYTDGQSC
gm012581_Glyma0 P-------------QFGQEERLALD-----EWHVAAVAHGDFRQLFPSKRRRMSSAQHES
                *               *  ::: **     **:.*:.:**.**: ** ** *  :  :..

AT1G29160.1     ----------------------
gm012581_Glyma0 QRKFVIIHEITEHPNQIETKEA
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1     - - - - M A T Q D S Q G I K L F G K T I T F N A N I T Q T I K K E E Q Q Q Q Q Q P E L Q A T T A V R S P S S D L T A E -
gm012581_Glyma0    M A E A Q S G Q A S E G I K L F G T T I T L H G - - - - - - - R E R K E D - - - - - - - - - - - - R N D S E D G T E E I
 
AT1G29160.1     K R P D K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K S K
gm012581_Glyma0    K R P D K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K V K
 
AT1G29160.1     P P G R V G G F A E L L G A A T G A V D Q V E L D A L L V E E W R A A T A S H G G F R H D F P V K R L R C Y T D G Q S C
gm012581_Glyma0    P - - - - - - - - - - - - - Q F G Q E E R L A L D - - - - - E W H V A A V A H G D F R Q L F P S K R R R M S S A Q H E S
 
AT1G29160.1     - - - - - - - - - - - - - - - - - - - - - -
gm012581_Glyma0    Q R K F V I I H E I T E H P N Q I E T K E A
 
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