fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G29160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012581 not found in 165aa AT1G29160.1 1st_1st 0.492492492 Ia
Gm036926 not found in 153aa AT1G29160.1 not_1st 0.411411411 II
Gm041570 not found in 153aa AT1G29160.1 not_1st 0.405405405 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G29160.1     ----MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAE-
gm036926_Glyma1 -----MAEESQGIKLFGAMITLNRG---EVNKGEKGSEYE----------------RVE-
gm041570_Glyma1 -----MGEESQGIKLFGALITLKGG---EVKKGEKGSEYE----------------RVE-
gm012581_Glyma0 MAEAQSGQASEGIKLFGTTITLHGR---ERKEDRNDSEDG----------------TEEI
                       : *:******  **::       :: .: .:                    * 

AT1G29160.1     KRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSK
gm036926_Glyma1 KRAEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAVGAGRRKVK
gm041570_Glyma1 KRAEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAVGAGRRKAK
gm012581_Glyma0 KRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKVK
                **.:*******************************.**************.******* *

AT1G29160.1     PPGRVGGFAELLGAATG---AVD---QVELD--ALLVEEWRAATAS-HGGFRHDFPVKRL
gm036926_Glyma1 SPCHGAGVYERTRCHAQHWFPADFSGQAAED---------HLSSAS-----RSIKSSTKT
gm041570_Glyma1 SPCHGAGDFMDGRAY-----------ETSEDENRFEMNQGHVAMPNTH--FRQIFQAKRQ
gm012581_Glyma0 P-------------------------QFGQEE-RLALDEWHVAAVA-HGDFRQLFPSKRR
                .                         :   :         : :        *     .: 

AT1G29160.1     RCYTDGQSC-----------------------
gm036926_Glyma1 QLGIIMKQEEKT--------------------
gm041570_Glyma1 RITSGAQHQGQ---------------------
gm012581_Glyma0 RMSS-AQHESQRKFVIIHEITEHPNQIETKEA
                :     :
BoxShade v3.31 C (beta, 970507) Output
AT1G29160.1     - - - - M A T Q D S Q G I K L F G K T I T F N A N I T Q T I K K E E Q Q Q Q Q Q P E L Q A T T A V R S P S S D L T A E -
gm036926_Glyma1    - - - - - M A E E S Q G I K L F G A M I T L N R G - - - E V N K G E K G S E Y E - - - - - - - - - - - - - - - - R V E -
gm041570_Glyma1    - - - - - M G E E S Q G I K L F G A L I T L K G G - - - E V K K G E K G S E Y E - - - - - - - - - - - - - - - - R V E -
gm012581_Glyma0    M A E A Q S G Q A S E G I K L F G T T I T L H G R - - - E R K E D R N D S E D G - - - - - - - - - - - - - - - - T E E I
 
AT1G29160.1     K R P D K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K S K
gm036926_Glyma1    K R A E K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K S C Q R Y W T A G G A L R N V A V G A G R R K V K
gm041570_Glyma1    K R A E K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K S C Q R Y W T A G G A L R N V A V G A G R R K A K
gm012581_Glyma0    K R P D K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K V K
 
AT1G29160.1     P P G R V G G F A E L L G A A T G - - - A V D - - - Q V E L D - - A L L V E E W R A A T A S - H G G F R H D F P V K R L
gm036926_Glyma1    S P C H G A G V Y E R T R C H A Q H W F P A D F S G Q A A E D - - - - - - - - - H L S S A S - - - - - R S I K S S T K T
gm041570_Glyma1    S P C H G A G D F M D G R A Y - - - - - - - - - - - E T S E D E N R F E M N Q G H V A M P N T H - - F R Q I F Q A K R Q
gm012581_Glyma0    P - - - - - - - - - - - - - - - - - - - - - - - - - Q F G Q E E - R L A L D E W H V A A V A - H G D F R Q L F P S K R R
 
AT1G29160.1     R C Y T D G Q S C - - - - - - - - - - - - - - - - - - - - - - -
gm036926_Glyma1    Q L G I I M K Q E E K T - - - - - - - - - - - - - - - - - - - -
gm041570_Glyma1    R I T S G A Q H Q G Q - - - - - - - - - - - - - - - - - - - - -
gm012581_Glyma0    R M S S - A Q H E S Q R K F V I I H E I T E H P N Q I E T K E A
 
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