fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G30500.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp034959 not found in 276aa AT1G72830.1 not_not 0.410334346 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G30500.2     --MTSSIHELSDN-IGSHEKQEQ-----RDSHFQPP-----IPSARNYESIVTSLVYSDP
pp034959_Pp1s31 MQAPSSAPAVTESALPTMQALPQPGYATSGADDQPPRPPTGVPATGDYLLPHTQL---EL
                   .**   :::. : : :   *      .:. ***     :*:: :*    *.*   : 

AT1G30500.2     GTTNSMAPGQYPYPDPYYRSIFAPPPQPYTG---VHLQLMGVQQQGVPLPSDAV-EEPVF
pp034959_Pp1s31 GHSMAQARAAYPFADPYFGGIVA----AYGAQAVIHPHMLGVQQARMPLPSEMMEEEPVY
                * : : * . **:.***: .*.*    .* .   :* :::****  :****: : ****:

AT1G30500.2     VNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED-
pp034959_Pp1s31 VNAKQYHGILRRRQSRAKAESENKLIKSRKPYLHESRHQHALRRARGNGGRFLNTKTKDG
                *****************: **:**:************* **:**.** ******:*.:* 

AT1G30500.2     EHHEDS-----SHEEKSNLSAGKSAMAAS-------------------------------
pp034959_Pp1s31 ESKANSDGSHGSHEGQSSQAANVSSTRASHSGMGMLGGQGDNVNYHTSMMQHGQNNAYLN
                * : :*     *** :*. :*. *:  **                               

AT1G30500.2     ---------------------------------SGTS------
pp034959_Pp1s31 LHPPQSFHSSAFHTLPGGSESEDGGSNGNNLVVSGSEHTAVAT
                                                 **:.
BoxShade v3.31 C (beta, 970507) Output
AT1G30500.2     - - M T S S I H E L S D N - I G S H E K Q E Q - - - - - R D S H F Q P P - - - - - I P S A R N Y E S I V T S L V Y S D P
pp034959_Pp1s31    M Q A P S S A P A V T E S A L P T M Q A L P Q P G Y A T S G A D D Q P P R P P T G V P A T G D Y L L P H T Q L - - - E L
 
AT1G30500.2     G T T N S M A P G Q Y P Y P D P Y Y R S I F A P P P Q P Y T G - - - V H L Q L M G V Q Q Q G V P L P S D A V - E E P V F
pp034959_Pp1s31    G H S M A Q A R A A Y P F A D P Y F G G I V A - - - - A Y G A Q A V I H P H M L G V Q Q A R M P L P S E M M E E E P V Y
 
AT1G30500.2     V N A K Q Y H G I L R R R Q S R A R L E S Q N K V I K S R K P Y L H E S R H L H A I R R P R G C G G R F L N A K K E D -
pp034959_Pp1s31    V N A K Q Y H G I L R R R Q S R A K A E S E N K L I K S R K P Y L H E S R H Q H A L R R A R G N G G R F L N T K T K D G
 
AT1G30500.2     E H H E D S - - - - - S H E E K S N L S A G K S A M A A S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp034959_Pp1s31    E S K A N S D G S H G S H E G Q S S Q A A N V S S T R A S H S G M G M L G G Q G D N V N Y H T S M M Q H G Q N N A Y L N
 
AT1G30500.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S G T S - - - - - -
pp034959_Pp1s31    L H P P Q S F H S S A F H T L P G G S E S E D G G S N G N N L V V S G S E H T A V A T
 
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